| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1858 |
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| Symbol | hugA |
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| ID | 3521677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1907260 |
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| End bp | 1909311 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284320 |
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| Product | heme transport protein HugA |
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| Protein accession | YP_268588 |
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| Protein GI | 71281206 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAT CAAAAGTTTC AGTGGCAGTC TGCTTAGCCT TGAGTAGTCA ATTAGCGATA
GCAGAAGTCA CAGACGAAGA TAAATATTTA CTTGATAGTA TCACCGTAAT TGCCAGTGAT
ACCGATATAC AAGAGTCCGT ACGATCTCCT CAAGCCATTA CTGCAGTTGA TGCTAAAACG
ATTAGCAATA TCAGCAGTAA AAACGTACCT GCCGCTATAC AAATTTTACC TAATGTTGAT
GTATTGGGAG GGCCCACGCC AAGTAATGAG AATGTTTCTA TTCGTGGTTT ACCACAATCC
CATGCCTATG TTGCTATTGA TGGTATTTAT CAAAGTAATT TCGCCACTAA GCGAGGTAGT
TGGTACTTGA ACCCTAATTT TATAAAAAAT ATTAAGGTTA CAGCGGGTCC AACCTCTGGC
GCTGCTGCGG GTAAGATTAC TATTGAAACA TTATCAGCCC TTGACCTATT GGCGGAAGGT
GACACTTTTG GCACTAAGAT TGATTTAGGT TATCGCAGTA ATAATGCACA ACAAGATTAT
GGTTTATCAC TTTTTGGTAA ATCAGATACG CTTGACTATT TAGTGTCTGG TCAAACAAGC
CAGCGAGACG CATATGAAAT CGGTGGTGTT GGCGGGACTT ATGACAAAAC ACGAGGGGAT
CAACAATCAG GTTTAATTAA AATTGGTAAT CAGTTTAATG CCGACCAACG TTTAACCTTC
ACTGTAAACT ATGATGACAG CCGCACTTTT CAAGTGAGAA ATGATGTTGG ATATCGTGAT
ACTAAATATG CCGGTAGTTC ACTAGTTTGG ACCGACCAGG CAAGTGATAA TGAATTACTC
GATTTACAAG CATCTGTGTA TTTCAATAAT GTAGATTCAT TCTCATGGGA AGAAGAAAGA
GGTGATGTTG AGGGGACTCA GGATATACAA GATAAGAGTT TTGGCTACAG TATCGGCAAT
AATTCGCTAG TGGATTTTGG ATTACTACAT TATGGGACTT CAGGGCATTT TACCACCCAC
ACAGGCGCTA TTCTCAAAAC TGATACGCAG ACAGGAGAGA TCATTGAAGA TGAAAGTGCC
GGTAGTGAGG CTTCAAGCAA TTCAATCAAG CTCGCCACCT GGATTAACAT GCAATTGCCC
GTCGGTGATT CGTTCGAAAT TATTCCAGGC GTAAGATATG ACTCTTTCTA CATTGAATCC
TCCAATGCGA TTGGTTTAGA AGGCGAGGCT TTATTAAGAG ATGGTCGTAC TGAAAGTAGA
GTCTCTAAGT CTTTGAATAT GCTTTATCAC TTTAATGATG AAATAAAATT CTTTGCCTCA
TATGCTGAAG CGTTGAATGC CCCAGGTAAT GGCTCGTTAT TTACGTCTGG CAGAGGTTTT
AAACCAAACC CAGAGCTGAA ATCGGAACGA GCGGATAACA AAGAGTTAGG TGTGGTTTTT
GACTACCAGA GCATTTTTTC TGAAGGCGAC TCTTGGGTTA GCAGAGTAAA TATTTTTCAA
AATGATATCA AAGACTTTAT TACCGATCTC TATAGTACTG AATGGCCCGA CGGGGAGCGA
GTAAATATCG GTCAAGCACA ATTAAAAGGT TTTGAATTCA GTACAAATTA TCACTTGGGA
GATTGGGACT TATCAGCAAG TTATGGACAA ACTCGAGGAA TAGATAAAAA CACCGGGTGG
TATTTAACTG ATATGCCATC CGATAAAATT AACCTTATTA GTAATTATAA CGTTAATGAT
GAGCTTGTTT TAGGTACGAG TGCGACCTTT GCTTTTACTC ATGATAAAAC ACCAACCCAG
CAACTAGTCG CTGGTGGAGA AATTGAAGAT ATCCCATCAG AAGGTGTAGG AAGCTGGTTT
ACTATGGATA TATTTTCAAC TTATGAACCA AAGAAAATAA AAGGATTTAA AGTTAATTTA
TCAATTACCA ACCTTTTTGA TCGTGGTTAT GCACAGCGAA TGGATTTTGA GAGAAATGGT
GACCCTAAAA ATCCAATCGA GTTTTATGAA GAAGGTCGTA GTATCAACGT GAAAATGAGC
TACGCATTTT AA
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| Protein sequence | MNTSKVSVAV CLALSSQLAI AEVTDEDKYL LDSITVIASD TDIQESVRSP QAITAVDAKT
ISNISSKNVP AAIQILPNVD VLGGPTPSNE NVSIRGLPQS HAYVAIDGIY QSNFATKRGS
WYLNPNFIKN IKVTAGPTSG AAAGKITIET LSALDLLAEG DTFGTKIDLG YRSNNAQQDY
GLSLFGKSDT LDYLVSGQTS QRDAYEIGGV GGTYDKTRGD QQSGLIKIGN QFNADQRLTF
TVNYDDSRTF QVRNDVGYRD TKYAGSSLVW TDQASDNELL DLQASVYFNN VDSFSWEEER
GDVEGTQDIQ DKSFGYSIGN NSLVDFGLLH YGTSGHFTTH TGAILKTDTQ TGEIIEDESA
GSEASSNSIK LATWINMQLP VGDSFEIIPG VRYDSFYIES SNAIGLEGEA LLRDGRTESR
VSKSLNMLYH FNDEIKFFAS YAEALNAPGN GSLFTSGRGF KPNPELKSER ADNKELGVVF
DYQSIFSEGD SWVSRVNIFQ NDIKDFITDL YSTEWPDGER VNIGQAQLKG FEFSTNYHLG
DWDLSASYGQ TRGIDKNTGW YLTDMPSDKI NLISNYNVND ELVLGTSATF AFTHDKTPTQ
QLVAGGEIED IPSEGVGSWF TMDIFSTYEP KKIKGFKVNL SITNLFDRGY AQRMDFERNG
DPKNPIEFYE EGRSINVKMS YAF
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