Gene CPS_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1828 
SymboltorR 
ID3519027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1878801 
End bp1879523 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content39% 
IMG OID637284290 
ProductDNA-binding transcriptional regulator TorR 
Protein accessionYP_268558 
Protein GI71278381 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGATA AACATATTTT AGTGGTAGAA GATGAAGCGA TAACACGAGC CAAACTGGTG 
GGTTATTTCC AACATGCTGG TTATCGAGTT AGTGAAGCGG AAAATAAAAG CCAAATGATG
GTGGTATTGG AAAATCATCA CATTGATTTA GTCATGTTAG ACATTAACTT GCCTGATGAA
GATGGCTTGA TGATCACTCG AAACCTGCGC AGCCATTCGA ACATTGGCAT TGTGCTTGTG
ACCGGGAGAA CTGACTCTAT CGATAAAATT ATTGGTTTAG AAATGGGCGC TGATGATTAT
GTTACTAAGC CTTTCGAGCT AAGAGAGCTG TTAGTTCGCG TTAAAAACAT TCTATGGCGC
ATATCATTAA CCGAGCAAAA ATCTGTTATA GCTACAGAAG ATGAGGAAGA TGACGATTTA
TTTCATTTTG GTCAATGCAG CTTTGATATT CCAAAACGAA AGTTGCTCAA AAATAATATT
CCAATAAAAC TAACTAAAGC TGAATACGAT ATTTTAGTGG CTTTTGTCGC TAACCCTAGC
CGAGTACTCA GCCGTGATCG ATTACTTAAT TTAATTGAGC ATAGAGTTGA TGCACCCAAT
GATAGAACCA TCGATGTGCT GGTTCGTCGT TTACGTCACA AAATAGAAGA TAATCCGAAA
GAGCCACAGA TTTTCACGAC GATTCATGGT GAAGGGTATT TATTCGCCGC TGATATTACC
TAG
 
Protein sequence
MNDKHILVVE DEAITRAKLV GYFQHAGYRV SEAENKSQMM VVLENHHIDL VMLDINLPDE 
DGLMITRNLR SHSNIGIVLV TGRTDSIDKI IGLEMGADDY VTKPFELREL LVRVKNILWR
ISLTEQKSVI ATEDEEDDDL FHFGQCSFDI PKRKLLKNNI PIKLTKAEYD ILVAFVANPS
RVLSRDRLLN LIEHRVDAPN DRTIDVLVRR LRHKIEDNPK EPQIFTTIHG EGYLFAADIT