Gene CPS_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1788 
Symbol 
ID3521726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp1831869 
End bp1832555 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID637284251 
ProductMaoC domain-containing protein 
Protein accessionYP_268519 
Protein GI71281255 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA TAGCGTTTAT TAGAGAAAAG AGAAAAAATT TACAACACCA AAATGATCAG 
TTTATCGCCA AGTTAGAGCC TAAATTTAAG AACTTATCAA ATTTATTCAA TAACAAAATC 
ACCATGCCTT TTAGAAATAC GCTAAATAAC CCTTGGTTCT CTCAATTTAG TCCTGTAGAT 
GCGGAAGAAA GTAAACCCGA GGAGGTATTG ATACAAGTAC CACAAGCAGA AAAAACCTAC 
AAAAGCCTGC TTGAAAAAAT CGATACAGTA ACATTTGTAG GTGATTGGCA TGAGGTAGAG 
CAAGAGTGTA TTGATCAATT TGCCGAAGTT ACAGGTGATA AACAATGGAT TCATACCGAT 
CCGATACGTG CAGCGAAAGA GTCTCCCTTT AAAGCGACAA TAGCGCACGG GTTTTTAACC 
TTGTCATTAA TTCCCAAGTT AACTAATTCA GTAGATTTAG ATAGTAACCC TTATCCAGAA 
GCAAAGATGG TTATTAATTT TGGTTTGAAT CAAGTGCGCT TTCCTTATCC GGTTAAAGCG 
GGTACTCGAG TTAGGGCCAG TATTAAACTA GTTAATTTAG TTCCTATGAA GCGTAGTATC 
GAAGTTGTTA ATGAAGTAAG TATTGAAGTT GAAAACAGTA AGCGTTTAGC CTGTGTGGCT 
GAAACCGTGT TACGTTTATA TTTTTAG
 
Protein sequence
MKVIAFIREK RKNLQHQNDQ FIAKLEPKFK NLSNLFNNKI TMPFRNTLNN PWFSQFSPVD 
AEESKPEEVL IQVPQAEKTY KSLLEKIDTV TFVGDWHEVE QECIDQFAEV TGDKQWIHTD 
PIRAAKESPF KATIAHGFLT LSLIPKLTNS VDLDSNPYPE AKMVINFGLN QVRFPYPVKA 
GTRVRASIKL VNLVPMKRSI EVVNEVSIEV ENSKRLACVA ETVLRLYF