| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1787 |
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| Symbol | |
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| ID | 3522727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1830310 |
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| End bp | 1831674 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284250 |
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| Product | putative tRNA modifying protein |
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| Protein accession | YP_268518 |
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| Protein GI | 71282254 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.738768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAG AGCAACATCA AGCCGTTGTT GACTCAGGCG CATCAAAAAA AGGCGCTAAA
GTTGGTTTCG TTTCACTTGG CTGCCCAAAA AACTTAGTTG ATAGTGAGCG TATACTTACG
CAACTTCGTA CTGAAGGTTA TGACGTAACC AATAGCTACG ATGATGCGGA ATTAGTGATT
GTAAATACTT GTGGTTTTAT TGATAGCGCA GTACAAGAAT CTTTAGATAC CATCGGCGAA
GCGTTAGCTG CAAATGGTAA AGTGTTGGTT ACTGGTTGTT TAGGCGTTAA GAAAGATGAA
ATTATTGAGT TACACCCCAA TGTATTAGGT GTTACGGGTC CTCATGCTTA TGATGAAGTA
TTGGCTCAAG TACATGAACA TGTCGCTAAA CCTGAACATA ACCCATTTAT TGATTTAGTA
CCGCCGCAAG GGGTTAAGCT TACGCCTAAG CATTATGCTT ATTTAAAAAT ATCAGAAGGC
TGTAATCACC GCTGTACGTT CTGCATTATT CCATCAATGC GCGGCGATTT AGACTCTCGT
CCAGTGGGTG ATGTATTAGG TGAAGCAAAA CGCTTAGTTG ATTCGGGTGT AAAAGAGTTA
TTAGTGATCT CACAAGATAC TTCTGCTTAT GGCGTTGATG TTAAACACAA AACAGATTTC
TGGGATGGCA TGCCCGTTAA AACACATATG CAGCAGCTAT GTGAAGAATT AGCAAAGCAG
GGCGTTTGGA TTCGTCTTCA TTATGTTTAT CCGTATCCGC ATGTTGATAA AATCATTCCA
TTGATGGCGG AAGGTAAAAT ATTACCTTAT TTAGATATTC CTTTTCAGCA TGCGAACAAA
CGCATTCTTA AATTAATGAA ACGTCCTGGT AGCTCAGACC GAGTATTAGA GCGTATTGCT
AAATGGCGAG AAATTTGTCC TGAATTGGTG ATAAGATCAA CTTTTATTGT TGGTTTCCCG
GGTGAGACAG AAGAAGAATT TGAAGAGTTA TTAAACTTTT TAGAAGAAGC ACAATTAGAC
CGAGTTGGTT GTTTTAAATA TTCACCTGTT GAAGGTGCTA CCGCTAATGC GTTACCTGAT
CATGTTTCAG ATGAAGTAAT GGAAGACCGT CTGCAACGTT TTATGGCAGT GCAAGCGAAA
ATCAGTAGCG ATAAATTACA AGTACGCATT GGTCAAGAAT ACCTTATTCT TGTTGATGAA
GTGAATGGTT TAGGTATTGT AGGCCGTTCA TATATGGATG CACCAGAAGT TGACGGTAAA
GTTTATTTGT CAGATGATTA TGATGCCAAA CCAGGCGACC AAATTTGGGT ACAAATCATT
CATGCCGATG AACATGATGT TTGGGGCGTT CGCGTAGAAG ATTAA
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| Protein sequence | MIAEQHQAVV DSGASKKGAK VGFVSLGCPK NLVDSERILT QLRTEGYDVT NSYDDAELVI
VNTCGFIDSA VQESLDTIGE ALAANGKVLV TGCLGVKKDE IIELHPNVLG VTGPHAYDEV
LAQVHEHVAK PEHNPFIDLV PPQGVKLTPK HYAYLKISEG CNHRCTFCII PSMRGDLDSR
PVGDVLGEAK RLVDSGVKEL LVISQDTSAY GVDVKHKTDF WDGMPVKTHM QQLCEELAKQ
GVWIRLHYVY PYPHVDKIIP LMAEGKILPY LDIPFQHANK RILKLMKRPG SSDRVLERIA
KWREICPELV IRSTFIVGFP GETEEEFEEL LNFLEEAQLD RVGCFKYSPV EGATANALPD
HVSDEVMEDR LQRFMAVQAK ISSDKLQVRI GQEYLILVDE VNGLGIVGRS YMDAPEVDGK
VYLSDDYDAK PGDQIWVQII HADEHDVWGV RVED
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