Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1756 |
Symbol | |
ID | 3518886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1801739 |
End bp | 1803925 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284219 |
Product | hypothetical protein |
Protein accession | YP_268487 |
Protein GI | 71278513 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03549] conserved hypothetical protein TIGR03549 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCA AAGTTAACTT TCTCGACAAC CTTAGACTTG AAGCCAAGTT TGACGATTTT AGTGTCATCG CTGATCAGCC TATTCGCTAT AAAGGTGATG GCTCAGCACC AGGTCCTTTT GATTATTTCT TAGCGTCATC AGCTATGTGT GCCGCATACT TTGTTAAGGT TTATTGTAAT TCTCGTGATA TTCCGACAGA GAATATTCGT TTATCACAAA ACAATATTGT TGACCCAGAA GACAGACATA ACCAAATCTT TCAAATTCAA GTTGAGTTGC CGGAAAGTAT TTCTGAAAAA GACAAAAAAG GTATTTTAAG ATCAATTGAC CGCTGCACCG TGAAAAAAGT AGTTCAGCAA GGGCCAGAGT TTAAAGTTGA GGCTGTTACT AGCCTTGAAG ACGATGCCCA AGCAATGTTG ATGCAACAAC CTGATGACGG TGTTAGCACC TTTATTTTAG GTAAAGATTT ACCACTAGAA GAAACCATCG CCAATATGTC AAAGTTATTG GCTGACCTTG GTATGAAAAT TGAAATTTCT TCGTGGCGTA ATATTGTACC TAATGTTTGG TCTCTACATA TTCGTGATGC CGCATCCCCT ATGTGTTTTA CTAACGGTAA AGGCGCAACG AAAGAGAGTG CACTTGCTTC AGCTTTAGGT GAATTCATTG AGCGCCTTAA TTGTAATTTC TTTTATAACG ATCAATTTTT CGGTACTGAC ATTGCCACCA GTGATTTTGT GCATTACCCC AATGAAAAAT GGTTTAAAGC GGGCGCAGAT GATGCACTAC CAAGCGATAT TTTAGATGAT TATTGTTTAG CTATTTACAA CCCAGACGAT GAACTACGTG CTTCAAACCT GATTGATACT AACTCAGGTA TGACTGAACG CGGTATCTGT TCAATTCCTT ATGTGCGTCA ATCAGACAGT GAAACGGTTT ATTTCCCTTC AAATCTTATT GAGAATTTAT TCTTAAGTAA TGGCATGAGT GCAGGTAACA ACTTACCTGA AGCACAAGTG CAATGTTTGT CAGAAATATT TGAACGCGCA GTTAAAAAAC AAATCATTGC TGAAGAAATT GTTTTACCTG ATGTACCTAA AGACGTTATC GCTAAATACC CAGCTATATT AGCAGGCATT GAAGGTCTAG AAGCGCAGGG CTTTCCTGTG GTAGTAAAAG ATGCCTCGTT AGGCGGAAAA TTCCCAGTAA TGTGCGTTAC TTTGATGAAT CCGAAAACGG GCGGTGTTTT TGCCTCATTT GGAGCACATC CAAGTTTTGA AGTAGCGCTT GAACGCAGCT TAACTGAGTT ATTACAAGGT CGAAGCTTTG AAGGTTTAAA CGATGTACCT AAACCTACCT TTAATAGCAT GGCAGTGACT GAGCCTGAAA ACTTTGTTGA CCACTTTATT GACTCAACGG GTGTAGTTTC ATGGCGTTTC TTTAGTGCTA AGCATGATTA TGAATTTGTT GAATGGGATT TTTCTGGTAC GAATGAAGAA GAAAATGCCG GTTTAATGGA CATTTTAAAA GATTTAGACA AAGAAGTGTA TATAGCTGAG TTCAATCAAT TGGGCGCTAC CGCATGTCGT ATTCTAGTTC CTGATTATTC AGAAGTGTAT CCAGTAGAAG ATCTTATTTG GGATAATACC AACAAATCAT TAGATTACCG CGAAGATATC TTAAATCTTC ATCGTTTAGA TGATGAAGCA TTAACAGGTT TGTTTGATCG TTTAGAAGAA AGCCAACAAG ATAACTACAT CGACATTCGC ACGTTAATTG GTATTGAGTT TGATGAAAAT ACTGTTTGGG GCCAGCTTAC TATTCTTGAA TTGAAAATTC TTATTTGTTT AGCTTTAGGT GCACTTGAAG ATGCGACTGA GCTAGTGGGT GAGTTTTTAC AATATAATGA TAATACCGTT GAACGTGGTT TATTTTATCA AGCCGTTCAT GCTGTTCTTG AAGTTACGCT TGATGAAGAG ATGGAACTCG AAGACTATCT GGGTAACTTT AATAGAATGT TTGGTGCAGA AAACATGGAG CAAGTAGTTG GCTCAGTATA CGGTGAGGTT AGATTCTATG GTCTAACGCC AACCAGCATG AAATTAGAAG GTTTAGATAA ACATTTAAGA TTGATTGAAA GCTACAAGAA GTTGCATCAA GCACGTAAAC TGGCTGCACA AAAGTAA
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Protein sequence | MEIKVNFLDN LRLEAKFDDF SVIADQPIRY KGDGSAPGPF DYFLASSAMC AAYFVKVYCN SRDIPTENIR LSQNNIVDPE DRHNQIFQIQ VELPESISEK DKKGILRSID RCTVKKVVQQ GPEFKVEAVT SLEDDAQAML MQQPDDGVST FILGKDLPLE ETIANMSKLL ADLGMKIEIS SWRNIVPNVW SLHIRDAASP MCFTNGKGAT KESALASALG EFIERLNCNF FYNDQFFGTD IATSDFVHYP NEKWFKAGAD DALPSDILDD YCLAIYNPDD ELRASNLIDT NSGMTERGIC SIPYVRQSDS ETVYFPSNLI ENLFLSNGMS AGNNLPEAQV QCLSEIFERA VKKQIIAEEI VLPDVPKDVI AKYPAILAGI EGLEAQGFPV VVKDASLGGK FPVMCVTLMN PKTGGVFASF GAHPSFEVAL ERSLTELLQG RSFEGLNDVP KPTFNSMAVT EPENFVDHFI DSTGVVSWRF FSAKHDYEFV EWDFSGTNEE ENAGLMDILK DLDKEVYIAE FNQLGATACR ILVPDYSEVY PVEDLIWDNT NKSLDYREDI LNLHRLDDEA LTGLFDRLEE SQQDNYIDIR TLIGIEFDEN TVWGQLTILE LKILICLALG ALEDATELVG EFLQYNDNTV ERGLFYQAVH AVLEVTLDEE MELEDYLGNF NRMFGAENME QVVGSVYGEV RFYGLTPTSM KLEGLDKHLR LIESYKKLHQ ARKLAAQK
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