| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1746 |
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| Symbol | |
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| ID | 3522319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1790167 |
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| End bp | 1791762 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284209 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | YP_268477 |
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| Protein GI | 71281847 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTAACC CTTCAATAAA TCAAGGACAT CATCAGGCTC ACATTATGAT AAAACTCACC
CATTCAGAAA GTTTTAAAAA GCTATTTTTT ACTTTATTTA GCGTGGTTAT CCTTTTATTA
AGTGTCAATG TGCCAGGTAC TTTGGCCGCT AATAATGATG AAGATTACCT CGCGGTTACC
ACTGAAAACC CCAATATTGA CCTTGGCGAA TTAGAGTTTT CCCTTACGCC TTTAACTAAA
GGTGAATTAA CGATAGAGGT AGATGCTTGG TTAGCCATTT TAAAAGCAAG AGCCACTATT
GTTAGTGAAG CAGAAATTCT AGTTAGTCAA AAACAAAAAA AGATTTTGGC TGCCCAAGAG
ATTTCTGATA TCAGCACTGA AAGTGCAATC CTACTTGATA AAAGTAAAAA CGATAAAGCG
GCAGCGAAAG AATTAAAAGA AGATTTGGAT GAAATTAAAT CGCTTGCCAG AGATATAAAG
CACAAAAAAG CAGATAAAGC GGTAGATGAA CTATCAAAAA CACCTGAATC TCTCAACCAG
CTCGCCAAAA AAGCAGACTT GTACAGTCAT AAAATGCAAA AAAGGCGCGA GTTGTTAATT
AAAAATCTTA CTCAATTAAG AGAAAAGAAA AATGATGCGT TAGAGCGTTT TCAATTGGTG
CTTAGTAGCT GGGAAAGCAA AGGTGGAGAT GGCACTGAGT TGCACCTATA TGCCAACGCA
CTATCAGGTA CAAACGTTGA TTTAACTGAT AGTGATGCAG CTTGGCTAAC GATTAAAGGC
TGGCTCTTAT CCCAAGATGG TGGCTTACGT TGGTTAGCAA ATATCATCAA ATTCACTTTA
GCATTGTTCT TTATATACAT ACTTTCTAGA ACCGCCGGAA AAATAACTGA TGCAGCACTT
AATCGTAATA GTAATTTATC AACGTTACTA AAATTATTTA TCAAAGTATC TGTTCGTCGA
GTAATTTTAA TTATAGGTTT TATTGTTTCA CTGACTTTAA TTGAAATAAA TGTCGCCCCG
GTATTAGCTC TAATTGGTGC CGCAGGTTTA GTGGTTGGTT TAGCGCTACA AGGTACGCTA
AGTAACTTTG CCAGCGGCAT GCTCATTCTA ATTTATCGCC CTTTTGATGT CGGTGATATC
ATTGAAATTG ATGGTGTGAC TGGAACCGTT CATTCTATGA CCTTATTATC TACGTCTATC
AAAACATTTG ATAACCAACA CTTGGTGGTG CCTAACAACA ATATCTGGGG TACAACTATT
GTTAACGTGA CAGGAAGTAG AACACGCCGT GTTGATCTTG TATTTGGCAT AGGTTATGGC
GATGACATGG TTAAAGCTGA AAAGATTATG CTTGATGTAG TAAGTAGGCA TGAACTCATA
CTCGAGAACC CGGCTCCTGT CGTTAAAGTT AATGAATTAG CTGATTCGTC AGTTAACTTT
GTTTGTCGTC CTTGGGTGAA AACAGAAAAT TACTTAGATG TTTATTGGGA TGTTACTCGC
CAAGTTAAAG AAGAGTTTGA TAAACAAGGT GTCTCAATAC CGTTCCCACA ACGCGATGTA
CATGTCCATC AGGTTGCTGA AATCACTGAG AAGTAA
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| Protein sequence | MANPSINQGH HQAHIMIKLT HSESFKKLFF TLFSVVILLL SVNVPGTLAA NNDEDYLAVT
TENPNIDLGE LEFSLTPLTK GELTIEVDAW LAILKARATI VSEAEILVSQ KQKKILAAQE
ISDISTESAI LLDKSKNDKA AAKELKEDLD EIKSLARDIK HKKADKAVDE LSKTPESLNQ
LAKKADLYSH KMQKRRELLI KNLTQLREKK NDALERFQLV LSSWESKGGD GTELHLYANA
LSGTNVDLTD SDAAWLTIKG WLLSQDGGLR WLANIIKFTL ALFFIYILSR TAGKITDAAL
NRNSNLSTLL KLFIKVSVRR VILIIGFIVS LTLIEINVAP VLALIGAAGL VVGLALQGTL
SNFASGMLIL IYRPFDVGDI IEIDGVTGTV HSMTLLSTSI KTFDNQHLVV PNNNIWGTTI
VNVTGSRTRR VDLVFGIGYG DDMVKAEKIM LDVVSRHELI LENPAPVVKV NELADSSVNF
VCRPWVKTEN YLDVYWDVTR QVKEEFDKQG VSIPFPQRDV HVHQVAEITE K
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