| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1726 |
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| Symbol | deaD |
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| ID | 3523325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1775322 |
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| End bp | 1777157 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284189 |
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| Product | RNA helicase DeaD |
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| Protein accession | YP_268464 |
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| Protein GI | 71277821 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.226291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC AAAAAACTGA AACTGTAACA GAACCTGAAG CTGTAGCTTT TGCCTCTTTA
GGCTTACCTG AAAACTTATT ATCTGCCGTT CTTTCTATTG GCTTTACTTC TGCTACCGAT
ATTCAAGCAC TAACTATACC ACCATTACTT GCTGGTAAAG ATGTGTTAGG TGAAGCTCAA
ACAGGTACAG GTAAAACTGC TGCCTTTGGT TTACCTGCAT TAGCAAAAAT TGATACTTCA
ATTAAAAAAC CACAATTAAT GGTTTTAGCA CCGACTCGTG AATTAGCAAT GCAAGTTGCT
GAAGCAATCG AATCTTTCGG TAAAGACATG AAAGGTTTAC GTGTTGCTAC ATTATACGGT
GGCCAATCTT ATGGACCACA ATTTCAACAA CTAGAGCGTG GCGCACAAGT TGTTGTTGGT
ACTCCTGGTC GTTTAATGGA CCACTTACGT CGCAAAAGCC TTAAATTAGA TGAATTACGT
GTTTGTGTGC TTGATGAAGC AGATGAAATG TTAAACATGG GCTTTTTAGA AGACATCCAG
TGGATTTTGG ATCATATACC AAAAACTGCA CAAATGTGTT TGTTCTCTGC GACCATGCCA
CCAGCGATTC GTAAAATTGC TAACCGTTTC TTAAAAGATC CTGAGCACAT TAAAGTTGCT
GCTGTTAAAA AAGCAAAAGC TAACATTACT CAGTACGCAT GGAAAGTTAG TGGCATCACT
AAAATGACTG CGTTAGAGCG TATTGCTGAA GTAGTTGAAT ACGATGCAAT GATTATCTTT
GTTCGTACTC GTAACGATAC TGTTGATATT GCTGAAAAAT TAGAACGTGC CGGTTACCCT
GCATTAGCAC TAAATGGTGA TTTGAACCAA GCACAACGTG AACGTTGTAT TGACCAAATG
AAATCTGGTA AATCATCTAT CCTAGTTGCT ACAGACGTTG TTGCTCGTGG TTTGGATATT
CCTCGTATCT CTTTGGTAAT TAACTATGAC TTACCGGGCG ATAACGAAGC ATATGTTCAC
CGTATTGGTC GTACTGGTCG CGCTGGTCGT GAAGGTATGT CAATTGCTTT TGTACGTCCA
CGTGAAATGT ACTCAATTCG TCATTATGAG CGTTTAACGA ATGGTACTGT TCTTAATTAC
GATTTACCAA ATATCCAAGA TATTGGTAAA ATACGTATTG AGCGTACTCG TGTTGAAGTA
GCAAAAATTG TTGCTGATAA AGATATCTCA AGCATGCGTG AAATTGTTGA AGGCATGGCT
GCTGAATCTG AAGTTTCTAT GATTGATCTT GCTGCTGCAT TGCTTTTCCA AAAGCAAATG
AAGCAACCAC TTCAACCAAA AGAAGATCCT AAGCCTCGTC GTGATGCACG TGAACGTACT
GATCGCAATG ACCGTGGTAA CGACCGTAAT AGCCGTGGTA ATGATCGCAA TAGCCGTGGT
AATGATAGCC GTAGTGCTGG TCGTGATTCA CGTGGTGGTG AGAACCGTAG TAACCGTGAT
GAAAAACCAC GTAAAGCTAA AGTTAATCGC AGTGATGTTG ATTGGCAAAC TTACCGCCTA
GAAGTCGGTA AAGAACATGG CGCTCGTCCA GGTGATATTG TTGGCGCTAT CGCTAATGAA
ATATCGCTTG ATAGTAGCTA CATCGGTGCT ATTAATTTAC ATGACAAACA TAGTTTTGTT
CAGTTACCTA AAGGTATCCC AACTGACTTG TTTAACCAGT TGAAAGGAGT ACGCGTTCGT
CGTCAACCTC TTTCAATCAC TACTTCAGAT GAAGCAGTTG TTAGCCAACA ACAGCGTCCA
GCTCGTCGTA CTGAAAAAGC ACCACGTCAT ACTTAA
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| Protein sequence | MTDQKTETVT EPEAVAFASL GLPENLLSAV LSIGFTSATD IQALTIPPLL AGKDVLGEAQ
TGTGKTAAFG LPALAKIDTS IKKPQLMVLA PTRELAMQVA EAIESFGKDM KGLRVATLYG
GQSYGPQFQQ LERGAQVVVG TPGRLMDHLR RKSLKLDELR VCVLDEADEM LNMGFLEDIQ
WILDHIPKTA QMCLFSATMP PAIRKIANRF LKDPEHIKVA AVKKAKANIT QYAWKVSGIT
KMTALERIAE VVEYDAMIIF VRTRNDTVDI AEKLERAGYP ALALNGDLNQ AQRERCIDQM
KSGKSSILVA TDVVARGLDI PRISLVINYD LPGDNEAYVH RIGRTGRAGR EGMSIAFVRP
REMYSIRHYE RLTNGTVLNY DLPNIQDIGK IRIERTRVEV AKIVADKDIS SMREIVEGMA
AESEVSMIDL AAALLFQKQM KQPLQPKEDP KPRRDARERT DRNDRGNDRN SRGNDRNSRG
NDSRSAGRDS RGGENRSNRD EKPRKAKVNR SDVDWQTYRL EVGKEHGARP GDIVGAIANE
ISLDSSYIGA INLHDKHSFV QLPKGIPTDL FNQLKGVRVR RQPLSITTSD EAVVSQQQRP
ARRTEKAPRH T
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