Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1724 |
Symbol | |
ID | 3519257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1771775 |
End bp | 1774183 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284187 |
Product | putative ATP-dependent protease LA |
Protein accession | YP_268462 |
Protein GI | 71279250 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACTT GCCTTGCAGA TCAAACCCGT CTGGGTATTG ATGACCTCAC TTCTTCTTTG TCAGCTTCAT TATTTTCCGA TGGGATAAAA CCAGTCAATA AAGGCAATGA ATTTGACGCA CAGGGATTTG TCGGTCATGA AAGAGCAAAA GAGGCTTTAG AATTTGGCTT ATCTATGTCT GCTATTGGCT TTAATGTTTT TGCTATGGGG GAACATGGCA CAGGGAGGCA AACATTAATT AAACAAATGT TAACTTCGCT CGCTAGTGCG AAAACGGCAC CAGATGAATG GTGTTATACC AATAACTTTG ACGAAAGTCA TATTCCGTTA ACGTTGTCGG TTAAGCCTGC TGATGGTAAA AAATTATTAG TAAGCATGAA TAAATTTATT GATGGCTTAC TGAGTTTATT TCCAGAGGTT TTTGATAATC CGGGCTACCA AAGACAAAAA TCAGCCATTG ATCGAGAGTT TAATCAAAAA TACGATCAAG CTATTTCAGT GGTTGAAGAG CTTGCTCTAA AAGAGAATGT GGTTCTGTAT GAAGAAAATG GCGAAGTAGG TTTTTCACCT TTAGTTGAAG GCAAGCCATT AAGTGATAAA GAATTTTCTA ATCTAAATGA AACAGATAGA GCTAATTTTT ATAAATCATT AAATGAATTA GAAAACGTGC TGTCTGAGCA ACTATTAGAG TTACCCTTAT GGAAGCGGCT TTCTTTTGAC CAGTTACGAA AACTTAAAAG TGATACCGCC GAGAGTGCTA TCAAACCTTA TATAACTGAA TTAGAAAAAG AGTTTAGTAA TAACGAAGGC GTACTAAGCT ATTTAGGCAA AGTGAAAAGC CACGTAGTCG ATGCCGTTTT AGAGATTTTA GTAACCGAGT CTGATGATAC CCCTACAGAT AAAGAATTAC GTAAATTAAT GGTTGAACGA TTTTTACCAA ACCTACTGGT ACCAAGAGAT AACACACAAG GGGCACCGGT AGTTTATGAA CAAAACCCGA CTTATCAAAA CTTATTTGGT CATGTCGACT TTGCTAGTTT TCAAGGGAGT AGCTATACCA GTTACCGCTT GATCAGACCA GGCGCATTGC ACAAAGCTAA TGGTGGTTAC TTACTATTAG ATGCTGATAA AGTGTTAAGC CAACCTATGG TGTGGTCACG CTTGAAGTTA GCGTTAAAAA CTCAACAGAT CACCATTGAA AATCCTTATT CAGAATATAG CCCACCTAGC GGATATAGCT TACAGCCAGA AAAAATCCCG CTGCAAGTTA AAGTAGTACT ACTTGGTGAT GCAGAAATTT ATTACACCTT ACAAGATTAC GACCAAGAGT TTACTGAGTT ATTTAGAGTC TTAGCCGACT TTGACCGCCA TCTTGATAAA ACGGATAGTA ATTTAATTGC GTTTGGACAA TTAATCAGAC AACGTGCTGA TAAACATAAT TATCCTGAAG TGAGTGATGA TGCAGTTTTA GAACTAGTTC GTTATGCCCT TAGACGAGGC GAACATAAAT ATAAAGTGTC AGCAAATATT GTACAGGTGA ATGATTTACT CGACGAAGCA AATTACTGTT GGCAAAAGCA GGGTAGCGAA GGCCCATTAA AGGCTCAACA TATTGCTTTA GCACAAGCCG CTAAAAAACG TCGTATCGGT CGGTTGAGCG AAACATGGCT CAGTGAAATT AAAGAGCAAC AAGTACTGAT TAATACCGAA GGTGGCTTTA TCGGTAAAGT GAATGGCTTA ACGGTACTTG AGATAGGAGA TAGTGTTTTT GGTACTCCTG CACGTATAAC GGCAACCGTT TATGCCGGTA GTGAAGGCGT TACAGATATT GAACGAGAGG TTGACTTAGG TAAGTCTATT CACTCCAAAG GTGTTTTACT GTTAACGGGT TATTTGGGCC ACAAGTATGG ACAAACATTC CCTGTAAGTA TTTCTGCCAA CATTGCCATA GAACAATCTT ACGGACATAT AGACGGTGAC AGTGCTTCTA TGGCTGAACT CTGTGCTCTT ATTTCTGCTA TTACTTTATT ACCAATAGAT CAAAGTCTTG CGATAACTGG TTCCATTAAC CAACACGGTG AAGTGCAATC AATTGGCGGT GTAAATGAGA AAATAGAAGG CTTCTTTCAG TTATGCCAAG ATAAAGGTTT AACAGGAACA CAAGGAGTTA TTATTCCGAA AACTAACGTC ATTAACTTAA TGCTTAATGA TGAAGTGATT AATGCTGTAG CTCGCGGAGA GTTTTCAATA CATGCCGTTG AAAGTATTGA TCAAGCACTG GAGTTATTGA TGAATGTGGA TGCTGGCATT ATCAGTAAGA CCGGTCGTTA TCCGCGTAAA TCTATTCATG GCCTGGCGCT TGATAAGTTA GAGAATTTTT CCGATATACT TAATGGCTCT GAAGAGTAA
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Protein sequence | MPTCLADQTR LGIDDLTSSL SASLFSDGIK PVNKGNEFDA QGFVGHERAK EALEFGLSMS AIGFNVFAMG EHGTGRQTLI KQMLTSLASA KTAPDEWCYT NNFDESHIPL TLSVKPADGK KLLVSMNKFI DGLLSLFPEV FDNPGYQRQK SAIDREFNQK YDQAISVVEE LALKENVVLY EENGEVGFSP LVEGKPLSDK EFSNLNETDR ANFYKSLNEL ENVLSEQLLE LPLWKRLSFD QLRKLKSDTA ESAIKPYITE LEKEFSNNEG VLSYLGKVKS HVVDAVLEIL VTESDDTPTD KELRKLMVER FLPNLLVPRD NTQGAPVVYE QNPTYQNLFG HVDFASFQGS SYTSYRLIRP GALHKANGGY LLLDADKVLS QPMVWSRLKL ALKTQQITIE NPYSEYSPPS GYSLQPEKIP LQVKVVLLGD AEIYYTLQDY DQEFTELFRV LADFDRHLDK TDSNLIAFGQ LIRQRADKHN YPEVSDDAVL ELVRYALRRG EHKYKVSANI VQVNDLLDEA NYCWQKQGSE GPLKAQHIAL AQAAKKRRIG RLSETWLSEI KEQQVLINTE GGFIGKVNGL TVLEIGDSVF GTPARITATV YAGSEGVTDI EREVDLGKSI HSKGVLLLTG YLGHKYGQTF PVSISANIAI EQSYGHIDGD SASMAELCAL ISAITLLPID QSLAITGSIN QHGEVQSIGG VNEKIEGFFQ LCQDKGLTGT QGVIIPKTNV INLMLNDEVI NAVARGEFSI HAVESIDQAL ELLMNVDAGI ISKTGRYPRK SIHGLALDKL ENFSDILNGS EE
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