| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1708 |
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| Symbol | |
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| ID | 3522972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1753950 |
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| End bp | 1756403 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284171 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_268446 |
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| Protein GI | 71282497 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC GTTTTAACTA CAGTACGCTA GCACTGTCTG TCTGCCTATC TTTAGGTAGC
ACAGTAACTT TTGCAGCGGA AAAGGACACT TCTGCTGGCG CAGAACATGC TGACATTGAA
CGTATAGTCA GTGTTGGTAC ACGTATATCT AACCGTACTG TTGCCGACAG CCCTTCTCCA
ATAGATATTA TTTCATCAGA AGCAATTAAA AATTCAGGCG CAACCAGTAC GCCTGATATG
TTACGAAAGT TGGCACCTTC ATTTAATATG AATAATACCA CCACGTCTGA TGGACAAGAT
TTAATGCGTC CCGCTACATT ACGTAGCTTA GGGCCAGATC AAGTATTAGT ATTAATCAAC
GGCAAGCGTC GTCATCAACA AGCAGTAGTT GCAGTACAAG AGAATGTTGG TCGCGGTAGT
GCAGGTACAG ATTTAAGCTC TATCCCTATG ACAGCTATTT CACACATTGA AATTTTACGT
GATGGTGCTG CAGCACAGTA TGGCTCTGAT GCTATTGCTG GTGTTATTAA CATCGTACTA
AAAGACGATT TAGGCGGTAG TGTTTGGGCA CAATATGGCC AAACAAGTGA AGGCGATGGT
GAATCAACTG AATTTGGTGG CAACTATGGC TTTGGCGTTG GTGATAAAGG CACATTAAAC
TTAACGTTTG AATATGCTGA TAATGGAGAG ATGAACCGAG CAACGCCAAC CACATGGTTT
GACGCAATTG ACGAACCTCG CCAATTATTA CTTGTTGGTG AAGCAGCTAC AGAGATGACT
AGCCTCTGGG CAAACTTTTC TTATGAATTA GGCGAAAGCA GTGAATTATA CGCTTTTGGT
GGTTTCACCA CTAAAGAAGG TGAATCTTTA GGCTTTTATC GTCCTGCCGA TGATAACCGC
GTATGGAGTT CATTATACCC TGAAGGTGTA ACACCTAAGC TTGGCTCAAA ATCAGAAGAT
TATTCAGTCG CTGTTGGTTT TAAAACACAA GTTGCAGACT GGGATATAGA TGCCAGTGTA
GTAACGGGTG AAAATAGATT TGAATTTAGT AACTTAGAAT CTTTAAACGC AAGTTATGGT
CCAGATAGCC CAACATCAGC TTATGATGGC GCGCTAATTT ATAGTCAAAC CACTTTTAAT
CTTGATGCAG TAACCGCTGT AGACTTAGGA TTTTTTGATG AAACCTCTTT AGCTTTTGGT
GCTGAGTTTC GTATAGATGG TTTTGCTCAA GAAGCTGGTG ACATGGTTAC GTATGCACGT
GGTGATACCC TTTGTGCAGA ATCAGTAAAT CCAACGGGCG ACCCATTAAT GACTGGTTGT
ATGGGTGGTG ATATCACTAC ACCTGGTATG CAAGGTTTCC AAGGATATAG CCCTGCAATG
GCAATAGATA CCGACAGAAA TAGTTTTGCG TTATATTTTG ATACTGAAAC AGCAGTTACT
GAAGACTGGT TAGTTGCTGC AGCCGTTCGT TATGAAGACT ATGATGACTT TGGTAGCACG
GTTATTGGTA AGTTATCGAC CCATTTAAGC TTAACAGAGA ATCTTGCTAT TCGAGCTTCA
GCATCGACAG GTTACCGTGC ACCAGGTATG CAACAAGCTA ACTTCACTCA ACGTTCAATT
TCGTTAGATA ATGGTGAACT TGCCGATTTA GTAACTTTAC GTCCAAATGA AGAATTGGCT
GAAGAATTAG GTTTTACTGA CCTTAAAGAA GAAAATTCTA CTAACTTCTC GGTTGGTGTT
ATTTACACTA ATGGTAACTA TTCATCGACT CTAGATGTTT ATCAAATAGA CATCGATGAT
CGTATTGTTT ATTCAGGTAA TATTTCTCGC GGAATTAACG ATGAGATTGA TGCTTTCTTC
GATCGTCACT CTGGTCCTGG TGACTCGTTA GATGGCGTAA AAAATGCTTC AATATTTACC
AACGCAATAG ATAGTGAAAC CTTTGGTCTT GATTGGGTAA ACCAATATAC GCAAGAACTG
AGCAGTATGG ATGTTGTCTA TGAGCTTTCT TATCACCATA ACAATACTGA AGTAAGTGCG
ATCAATACTT CTTCTTCTAT TGTACCAAAT GAAGTTGTTT TTGATAACGC ACAAAGACTA
TTAGTAGAAA AAGCACAACC TCAAGACAGA GCCTCTTTAT CAGCCATGTT TGATATGGAC
ACCTGGTCGG TAACAGGTCG CATGACTTAT TACGGTGAAG TAACTTCAGC TTCTTACGGT
ACGCCTGAAA ATACTTGGGG TGCTAAAAGT TTATTTGACG TAACGGCTCA ATGGGAAGTT
ACCGATAATA TTAATATTAG CGGTGGTGTT CTTAACTTAA CTGATGAATA TCCTGATGAA
TGGGGCACAA ATGGTTCTCC ATTTACTGAC CTTGGCTTCA AATATGGTTG GACTAGTTTC
CCGTTCTCTC TTGCAGGACG TGAATATTAC GTAAGAGCTT CATATAACTT CTAA
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| Protein sequence | MKKRFNYSTL ALSVCLSLGS TVTFAAEKDT SAGAEHADIE RIVSVGTRIS NRTVADSPSP
IDIISSEAIK NSGATSTPDM LRKLAPSFNM NNTTTSDGQD LMRPATLRSL GPDQVLVLIN
GKRRHQQAVV AVQENVGRGS AGTDLSSIPM TAISHIEILR DGAAAQYGSD AIAGVINIVL
KDDLGGSVWA QYGQTSEGDG ESTEFGGNYG FGVGDKGTLN LTFEYADNGE MNRATPTTWF
DAIDEPRQLL LVGEAATEMT SLWANFSYEL GESSELYAFG GFTTKEGESL GFYRPADDNR
VWSSLYPEGV TPKLGSKSED YSVAVGFKTQ VADWDIDASV VTGENRFEFS NLESLNASYG
PDSPTSAYDG ALIYSQTTFN LDAVTAVDLG FFDETSLAFG AEFRIDGFAQ EAGDMVTYAR
GDTLCAESVN PTGDPLMTGC MGGDITTPGM QGFQGYSPAM AIDTDRNSFA LYFDTETAVT
EDWLVAAAVR YEDYDDFGST VIGKLSTHLS LTENLAIRAS ASTGYRAPGM QQANFTQRSI
SLDNGELADL VTLRPNEELA EELGFTDLKE ENSTNFSVGV IYTNGNYSST LDVYQIDIDD
RIVYSGNISR GINDEIDAFF DRHSGPGDSL DGVKNASIFT NAIDSETFGL DWVNQYTQEL
SSMDVVYELS YHHNNTEVSA INTSSSIVPN EVVFDNAQRL LVEKAQPQDR ASLSAMFDMD
TWSVTGRMTY YGEVTSASYG TPENTWGAKS LFDVTAQWEV TDNINISGGV LNLTDEYPDE
WGTNGSPFTD LGFKYGWTSF PFSLAGREYY VRASYNF
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