| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1706 |
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| Symbol | |
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| ID | 3522812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1750268 |
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| End bp | 1751866 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284169 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_268444 |
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| Protein GI | 71282339 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTTG TTATTGAATC AAGCGATAGA ATAGGTATTT CCCAAGAAAT ATTAGCTATA
TTTGCCAAGC AAGCTTGGAA TTTAAAAACC GTAGAAATTA CCAGCTGTTT TACCTATGTG
CATGTTGAAT ATGCTGCGTT AACGCTTTCG TCAATTAGAG AATGCTTAGC CTCAGTTATT
GGCGTTAACA GTGTAGAGGT GATTAATTTA TTACCTAGTG AACAACGAGA GAGTCATTTA
CAAGCCTTAT TAGATAAAAT GCCTGAGCCT ATTATCGATG TTGATAGTAA TGGACTAATT
TTGGCTATGA ACAAGGCAAG TCATAAGCTT AAGCCGTCAA AGGATGCAAC TGAGCCTGAG
TTGGTTACAA CGGATTACTT GGGCAAGCCA ATCGAAGCGT TTCTTGGGCA AATTAATAAA
ACTATGCTCA CCAATGCCGC TACCAGCCAA GCCGTGACTA TTGAAGGGAG GGCCTACATT
CTTGATGTAA GTCCCGTAAT ATCAAGTAAC AGTTCAACCT TAGAACAAGA CAATACTGGG
CAAGTAAGTG GCTCAGTGCT ACTTTTTCGC TCAATGAATA CCCTAGGGCG TCAAATTTCA
TTAATGCAAA GTCATCAAGA TCACAGTTTT GATAGCATTA TTGGTCAATC AAAAAGTATC
AGTTTAATTA AGGCGCAAAG TAAACGTTTT GCGGAATTAG ATTTACCGGT ATTAATCAGT
GGTGAAACCG GTACAGGTAA AGAGTTAATC GCTCGAGCAT TACATCAAGC GAGCTCAAGA
TCTAAAGCGC CTTTTTTAGC GATAAACTGC TCAGCACTAC CTGAACATTT ATTAGAAAGT
GAGCTATTTG GTTATGCTAG TGGCGCATTT ACGGGGGCCC AAAAAGGCGG TAAACCTGGA
TTAATTGAAC TAGCTGAAGG TGGCTGTTTA TTTTTAGATG AAATTGCAGA AATGTCACCG
TATTTACAAG CAAAATTGTT ACGATTTTTA CAAGATCTCA CTTATCGTCG TGTTGGTGGT
ACTAAAGAAC TGGTTGCTAA TATACGTATT GTCAGTGCCA GTCACCAAGA CTTAGCCAAA
CTCATTAGTC AGAAAACCTT TCGAGAAGAT CTTTATTATC GCTTAAATGT GCTGAGTATC
GATTTACCAC CACTAAGAGA GCGTATGGCA GACATGAGTC TCTTGGCTAA CTTGTTTATT
GAAAATGCGG CTAAACAAGT CAGTAACAGT CAACAAACAG ATATTGCAAA GCCAAAACTT
ACTGCACAAG CACTTAGTTT ATTACAGGGA TTCGCTTGGC CAGGAAATAT TAGGCAACTA
CAAAATGTTT TATTCAGTGT TGTTGCTTTG AATAATGGCG GTGATATTTG TGCTGATGAC
TTGTTACAAG TCCTCAATAA GCATGCTGGT AAACAACAGC TTAGTAATGA TATAGATATT
CAAACAATTA AAGATTGGTC TAGTGCTCAA GCTGATTTTG AAGCTAAATT ACTTGAACAT
CTCCATCCGT TATTTCCGAC AACACGAAAA TTGGCTGAGC GTTTAAATGT CTCACACAAT
AAAATAGCGA TGAAACTAAG AGAACATGGC ATAAAATAA
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| Protein sequence | MRVVIESSDR IGISQEILAI FAKQAWNLKT VEITSCFTYV HVEYAALTLS SIRECLASVI
GVNSVEVINL LPSEQRESHL QALLDKMPEP IIDVDSNGLI LAMNKASHKL KPSKDATEPE
LVTTDYLGKP IEAFLGQINK TMLTNAATSQ AVTIEGRAYI LDVSPVISSN SSTLEQDNTG
QVSGSVLLFR SMNTLGRQIS LMQSHQDHSF DSIIGQSKSI SLIKAQSKRF AELDLPVLIS
GETGTGKELI ARALHQASSR SKAPFLAINC SALPEHLLES ELFGYASGAF TGAQKGGKPG
LIELAEGGCL FLDEIAEMSP YLQAKLLRFL QDLTYRRVGG TKELVANIRI VSASHQDLAK
LISQKTFRED LYYRLNVLSI DLPPLRERMA DMSLLANLFI ENAAKQVSNS QQTDIAKPKL
TAQALSLLQG FAWPGNIRQL QNVLFSVVAL NNGGDICADD LLQVLNKHAG KQQLSNDIDI
QTIKDWSSAQ ADFEAKLLEH LHPLFPTTRK LAERLNVSHN KIAMKLREHG IK
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