Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1679 |
Symbol | acpD1 |
ID | 3518599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1724596 |
End bp | 1725174 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284142 |
Product | FMN-dependent NADH-azoreductase |
Protein accession | YP_268417 |
Protein GI | 71278829 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTT TAAGGCTTGA TGCAAGCATG AGAAAAACAG GCTCATATAG CCGAATTTTA ACTGATAAGT TAATTGAACA ACTTACAAGT GGAAAAAATA ACGAAGTAAC AATTAGGGAC TTGGCTGATG GTATTCCGTT GATTGATGAA AATTGGATTA AGGCTAATTT TACTGATGTT GATGAGCGAA CTTGTGAGCA AAAAGTGTGT TTGGTCGCGT CTGATATATT AGTTGATGAA CTATATAAAG CAGAACATAT TGTAATCGGT CTTCCTATTT ATAATTTTGG TGTACCGGCA GCCTTTAAGG CATGGATTGA CCAAGTTGTT AGATCTAAAT TAACCTTTCG TTACGGTGAT AATGGGCCAG TTGGTTTAGT AGAGAATAAA AAGGCATATA TCATTATTGC TTCTGGTGGC ACAAAATTAG GCACTGAAAT TGATTTTATT TCTGACTATT TACGGCATAT ATTAGGCTTT ATTGGCATTA CCGATGTCAC CTTTATTGAC AGTAGTGGTC TTGGGCGAGA TGAATCTCAA ACTTTAGCTC ATGCACATAA AGCCATTGAA CGTGTTTAA
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Protein sequence | MNILRLDASM RKTGSYSRIL TDKLIEQLTS GKNNEVTIRD LADGIPLIDE NWIKANFTDV DERTCEQKVC LVASDILVDE LYKAEHIVIG LPIYNFGVPA AFKAWIDQVV RSKLTFRYGD NGPVGLVENK KAYIIIASGG TKLGTEIDFI SDYLRHILGF IGITDVTFID SSGLGRDESQ TLAHAHKAIE RV
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