Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1563 |
Symbol | lpxD |
ID | 3523357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1608564 |
End bp | 1609613 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637284026 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_268305 |
Protein GI | 71278708 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.153093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTACA CGTTAGCTGA AATTGCTATC AAACTAGATG CTAAATTGAT AGTACCAGCT GCGCTAGATG AGCAAAACGA AGCACTGACT CAAATCAGTG GCTTAGCAAC TTTAGCAAAG GCGGGGACAG GGCAAGTGGC TTTTCTTGCC AATAGCAAGT ATCAGCAACA ACTTAGCTCA ACTAATGCGA GTGCGGTGAT TGTCTCTCCT GATGCCGTAG AGGCCTGTCA GGTCAGTGCT CTTGTCATGG ATAACCCTTA TATGGGGTAT GCCATGCTAG CTAGTTTACT TGATAGTACG CCAAAAGTGT CTTGTGGGAT TCATCCCAAT GCTGTTATTG CCGATGATGT TTTAATCGGT GAAAATGTAA GTGTTGGCGC TAATACAGTT ATTGAGTCAG GTGTGCAACT AGCTGATAAT GTAAGTATTG GTGCCGGTTG CTTTATTGGT CATGGGGCTA AAATTGGTGA ATCAACGATA CTCTGGGCAA ATATTACTAT TTATCACAGA GTAGAGATTG GTCATCATTG CTTAATTCAA GCTAGCACTG TTATTGGCTC CGACGGTTTT GGTTATGCGC CGGTAAAAGG GCAGTATAAA TGGCATAAAA TCCCGCAATT AGGCAGCGTC ATTATTGGCG ACCATGTTGA GATTGGCGCT AGTACTACTA TTGACCGAGG GGCACTGGAT AATACCGAAA TAAGAGACGG TGTAATTTTA GATAACCAAA TTCAAATTGC TCACAATGTT ATTGTTGGCG AGAATACCGC CATAGCAGGT TGTACCGTCA TTGCAGGTAG CACTGTCATA GGTAAGAATT GTACTATTGC CGGTCTGGTC GGAGTTAATG GTCATATTAC TATTGCTGAT AATTGTGTTT TTACTGGCAT GTCCATGGTA ACCAAGAATA TCAGTCAAGC AGGAGTGTAT TCTTCTGGTA TGCCAGTAGT ACAAAATAAA GAATGGAATA AAACTAATGC CAGAGTTAAG CGACTTGATA GCTTGACTAA ACGAGTGAAA GAGTTAGAAA AATTACTCGC TAAAAACTAG
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Protein sequence | MTYTLAEIAI KLDAKLIVPA ALDEQNEALT QISGLATLAK AGTGQVAFLA NSKYQQQLSS TNASAVIVSP DAVEACQVSA LVMDNPYMGY AMLASLLDST PKVSCGIHPN AVIADDVLIG ENVSVGANTV IESGVQLADN VSIGAGCFIG HGAKIGESTI LWANITIYHR VEIGHHCLIQ ASTVIGSDGF GYAPVKGQYK WHKIPQLGSV IIGDHVEIGA STTIDRGALD NTEIRDGVIL DNQIQIAHNV IVGENTAIAG CTVIAGSTVI GKNCTIAGLV GVNGHITIAD NCVFTGMSMV TKNISQAGVY SSGMPVVQNK EWNKTNARVK RLDSLTKRVK ELEKLLAKN
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