| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1561 |
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| Symbol | |
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| ID | 3522056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1605425 |
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| End bp | 1607878 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284024 |
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| Product | OMP85 family outer membrane protein |
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| Protein accession | YP_268303 |
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| Protein GI | 71281584 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.347163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TTGCCTTAGC CCTACTATTA GGTGCGCTAG GAACATCAGT ACCTATTGCT
CAAGCTGCAT CAAGCTTTCA AGTTGAAGAC ATCGAAGTTA AAGGTCTTCA ACGTGTTGCT
TTAGGGGCCG CGTTAACGCA TATACCTTTC AATGTCGGTG ACGAACTCAA TGACTTTCGA
ATTTCACAAT CTATAAAGGC CTTATACCAA GCCGGTCACT TTAATGATAT TAGAGTTTAC
CGAGATGGTA ATCGCTTGGT TTATCGTGTT AGAGAACGAG AAACAATAAA CGAAATTATT
TTTGATGGTA ATAGCGATCT TAAAGATGAG CAGCTAACAG AAAGTCTTGA TGGTAGTAAT
ATTCGTGTCG GTGAAACTCT TGATCGCACC GTCATCTCTG GTATAGAGAT GGGCTTAGAG
AACTTCTATC ACAGTGTGGG TAAATACAAT GCGAAAGTGA CCGCTAAAGT AACCCATTTA
CCACGAAACC GCGTTAATTT AGAGTTCTCA TTTGTTGAGG GTGACTCTGC TGCTATCAAA
CAAATAAATA TTGTTGGTAA CGAAGTTTTT TCTGATATAG AAATTCTGGA TAAAATTGAG
CTAACGTATG ATTCCCCTTG GTGGAATTTT ATGGCGCAAG ACAGATATCA GAAACAAACG
TTACAAGGGG ATATGGAAAC GATTAATAGT TATTATCTTA ATCGCGGCTA TTTACGCTTT
AAAGTAGACT CCACACAAGT ATCAATGACC CCAGATAAAA AAGCGGTCTA TATCGCCCTT
AATGTGAGTG AAGGTGAAAC TTATAACATT AGTGAAGTTG ACTTTGTCGG TGACATGGCT
GGTTTTGAAA ATACCATCCG TGCTATTAAC CCATTACAAG CGGACGAGTT ATATAACGGT
GCAGAAGTTA CTTATACTGA AGAAGTTATT AGTAAATTTT TAGGTCGCTA TGGTTATGCT
TATCCTAAAG TGAGAACCAT TCCAGAAGTT AATGACGAAA ACCATACCGT TAAATTATCA
ATATCGATTG ATCCCGGAAA GCGTGTTTAT GTAAATCGCA TAAACTTCAC AGGTAATCAT
GTTACTGCTG ATAACGTATT ACGCCGTGAA ATGAGACAAA TGGAAGGTGC TTGGTTATCT
AACAGTGTAG TTGAATCTTC AAAGTCATGG TTACAGCGTC TACCTTATAT GGAGACCGTT
GAGTTTGAAA CTAAACAAAT TGAAGGTGAA GATGATTTAG TCGATATCGA CTTTACTGTT
AAAGAACAGC CTTCTGGCTC ATTTAATGCT GGTATAGGTT ATGGTTCAGA AACAAAGTTA
AGCCTTAACG CGGGTGTACA ACAAAACAAC TTCCTAGGCA CGGGTAATCA ACTGGGCTTA
AACATTGCCA GAAACAGTTA TCAAAAAAAT GCCACTATCT CGTACACTGA CCCTTACTTT
ACCGTTGATG CTGTCTCCCT TGGTGGACAA GTTTATTACA GTGAATATGA TGCTGGTAAT
GCCAACTTGG TTGAATATAA GAACAAAACC TTCGGCCTAG GTCTTAACTG GGGTTTTCCA
GTCAATGAAT ATCTTCGCTT AAATTTTGGT GTAGGTTGGA AGTATAACCA AATATCGCAA
TTAGAAGCGT ATGATCAGAT TCAAAACTTT TATGATATCT ATGCTGATCC TAATGACCCC
GATGGTCAAT TAGCCTTTAA AACGTTAGAT TTAAATGCTG GTTTATCACG AAGCACACTA
AACCGTGGTA CTTTTCCTAC GTCAGGTTCA CAACAACGAT TTAATGCGAA AATGACGTCA
CCAAAGTCTG ATTTGCAATA CTTCAAACTA AATTATGATG CTAAATTTTA TTTCCCATTA
ACCCGAAGTC AAAAATGGTC AGTACTAACT CGTATACAGT TAGGCTACGC CAATGGTTAC
GGAACCGTTG ATGGCAATGA TCAATTATTA CCTTTCTGGG AGAACTTTAG TGCAGGTGGC
TCAGATTCTT TAAGAGGTTT TGAGAATAAC AGTGTTGGAC CTCGTGCTAT ATATCGTAGC
CCGAAGCAAC TACCTGGTGG GGGCTGTTGT TTAGGTCCTG ACAATGATTC TATTGCGGTA
TCACAAAGCT CTGTTGGTGG TAATGCTATG GCGCTTGCAG GCTTAGAGTT GATAGTACCA
ACACCTTTCT TAGACGAAAG TTACTCAAAC AGTGTACGTA CCAGTATTTT TTGGGACGCA
GGTACTGTTT GGGATACAGA ATTTAACATG GCAAGTTATT CAAATTTAGC GCCTGAAGAG
TTTGCTAAAA TTGACGACTA TTCAGATCCG GGACGTTTTC GTAGCTCTGC AGGTATTTCA
CTGCAATGGC TTTCGCCAAT GGGACCAATG ATTTTTAGTT TCGCTAGATC CGTTAGAGAA
GAAGAGGGTG ATGATCTATC ATTCTTTAGC TTTAACATAG GAAAAACATT TTAA
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| Protein sequence | MKKIALALLL GALGTSVPIA QAASSFQVED IEVKGLQRVA LGAALTHIPF NVGDELNDFR
ISQSIKALYQ AGHFNDIRVY RDGNRLVYRV RERETINEII FDGNSDLKDE QLTESLDGSN
IRVGETLDRT VISGIEMGLE NFYHSVGKYN AKVTAKVTHL PRNRVNLEFS FVEGDSAAIK
QINIVGNEVF SDIEILDKIE LTYDSPWWNF MAQDRYQKQT LQGDMETINS YYLNRGYLRF
KVDSTQVSMT PDKKAVYIAL NVSEGETYNI SEVDFVGDMA GFENTIRAIN PLQADELYNG
AEVTYTEEVI SKFLGRYGYA YPKVRTIPEV NDENHTVKLS ISIDPGKRVY VNRINFTGNH
VTADNVLRRE MRQMEGAWLS NSVVESSKSW LQRLPYMETV EFETKQIEGE DDLVDIDFTV
KEQPSGSFNA GIGYGSETKL SLNAGVQQNN FLGTGNQLGL NIARNSYQKN ATISYTDPYF
TVDAVSLGGQ VYYSEYDAGN ANLVEYKNKT FGLGLNWGFP VNEYLRLNFG VGWKYNQISQ
LEAYDQIQNF YDIYADPNDP DGQLAFKTLD LNAGLSRSTL NRGTFPTSGS QQRFNAKMTS
PKSDLQYFKL NYDAKFYFPL TRSQKWSVLT RIQLGYANGY GTVDGNDQLL PFWENFSAGG
SDSLRGFENN SVGPRAIYRS PKQLPGGGCC LGPDNDSIAV SQSSVGGNAM ALAGLELIVP
TPFLDESYSN SVRTSIFWDA GTVWDTEFNM ASYSNLAPEE FAKIDDYSDP GRFRSSAGIS
LQWLSPMGPM IFSFARSVRE EEGDDLSFFS FNIGKTF
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