Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1553 |
Symbol | rpsB |
ID | 3522975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1597017 |
End bp | 1597745 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284016 |
Product | ribosomal protein S2 |
Protein accession | YP_268295 |
Protein GI | 71282500 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACG TTTCAATGCG CGATATGCTT AAAGCAGGTG TTCACTTCGG TCACAAAACT CGTTACTGGA ATCCTAAAAT GAAGCAATTC ATTTTTGGTG CTCGCGATAA AGTTCATATC ATTAACCTTG AACAAACAGT TCCTATGTTC AATGAAGCAC TTGCTTTTGT AAACAATGTT TCATCGAAAA AAGGTAAAGT ATTATTTGTT GGTACTAAAC GTGCTGCAAG TGATGCAATC AAAGATGCTG CTATTAAGTC TGACCAATTC TACGTTAACC ACCGCTGGTT AGGTGGTATG TTGACTAACT GGAAAACAGT TCGTCAATCT ATCAAACGTT TAAAAGATTT AGAATCTCAA AGCACTGACG GTACTTTCGA AGCGTTAACT AAGAAAGAAG CGTTAATGCG TACTCGTGAA ATGGAAAAGC TTGATAAAAG CTTAGGTGGT ATCAAAAACA TGGGTGGTTT ACCTGACGTT TTATTTATCA TTGATGCTGA TCACGAGCAC ATTGCTATTA AAGAAGCAAA CAACCTTGGT ATCCCAGTAA TTTCTGTTGT TGATACTAAC TCAAACCCTG ATGGCGTTGA TTACGTTGTT CCAGGTAACG ATGATGCAAT TCGTGCTGTC ACTTTATATT GTGATGCTGT TGCTAACTCT GTGCTTAGCG GCCGTGAGCA AAACATCGTA GTACAAGCTG AAAAAGACGG TTTTGTTGAA GCTGAATAA
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Protein sequence | MSNVSMRDML KAGVHFGHKT RYWNPKMKQF IFGARDKVHI INLEQTVPMF NEALAFVNNV SSKKGKVLFV GTKRAASDAI KDAAIKSDQF YVNHRWLGGM LTNWKTVRQS IKRLKDLESQ STDGTFEALT KKEALMRTRE MEKLDKSLGG IKNMGGLPDV LFIIDADHEH IAIKEANNLG IPVISVVDTN SNPDGVDYVV PGNDDAIRAV TLYCDAVANS VLSGREQNIV VQAEKDGFVE AE
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