Gene CPS_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1553 
SymbolrpsB 
ID3522975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1597017 
End bp1597745 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content38% 
IMG OID637284016 
Productribosomal protein S2 
Protein accessionYP_268295 
Protein GI71282500 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACG TTTCAATGCG CGATATGCTT AAAGCAGGTG TTCACTTCGG TCACAAAACT 
CGTTACTGGA ATCCTAAAAT GAAGCAATTC ATTTTTGGTG CTCGCGATAA AGTTCATATC
ATTAACCTTG AACAAACAGT TCCTATGTTC AATGAAGCAC TTGCTTTTGT AAACAATGTT
TCATCGAAAA AAGGTAAAGT ATTATTTGTT GGTACTAAAC GTGCTGCAAG TGATGCAATC
AAAGATGCTG CTATTAAGTC TGACCAATTC TACGTTAACC ACCGCTGGTT AGGTGGTATG
TTGACTAACT GGAAAACAGT TCGTCAATCT ATCAAACGTT TAAAAGATTT AGAATCTCAA
AGCACTGACG GTACTTTCGA AGCGTTAACT AAGAAAGAAG CGTTAATGCG TACTCGTGAA
ATGGAAAAGC TTGATAAAAG CTTAGGTGGT ATCAAAAACA TGGGTGGTTT ACCTGACGTT
TTATTTATCA TTGATGCTGA TCACGAGCAC ATTGCTATTA AAGAAGCAAA CAACCTTGGT
ATCCCAGTAA TTTCTGTTGT TGATACTAAC TCAAACCCTG ATGGCGTTGA TTACGTTGTT
CCAGGTAACG ATGATGCAAT TCGTGCTGTC ACTTTATATT GTGATGCTGT TGCTAACTCT
GTGCTTAGCG GCCGTGAGCA AAACATCGTA GTACAAGCTG AAAAAGACGG TTTTGTTGAA
GCTGAATAA
 
Protein sequence
MSNVSMRDML KAGVHFGHKT RYWNPKMKQF IFGARDKVHI INLEQTVPMF NEALAFVNNV 
SSKKGKVLFV GTKRAASDAI KDAAIKSDQF YVNHRWLGGM LTNWKTVRQS IKRLKDLESQ
STDGTFEALT KKEALMRTRE MEKLDKSLGG IKNMGGLPDV LFIIDADHEH IAIKEANNLG
IPVISVVDTN SNPDGVDYVV PGNDDAIRAV TLYCDAVANS VLSGREQNIV VQAEKDGFVE
AE