| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1519 |
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| Symbol | fliA |
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| ID | 3522182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1562374 |
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| End bp | 1563093 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283982 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_268261 |
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| Protein GI | 71281710 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAAAAG TGAATAGCTA TAATAATCAA ATTGATAAAG CAGCTCTTCT TGAACAACAA
ACTGTTTTAG TCAAGCGCAT TGCTTATCAT CTTTTAGCAA GATTGCCAGC AAGTGTTCAA
GTTGATGACT TGATACAGTC AGGAATGATT GGTTTATTTG AAGCGGCAAA TAATTTTGAT
AACACTAAAG GCGCAAGCTT TGAAACATTT GCTGGTATCA GAATCCGTGG CGCTATGCTT
GATGAAATAC GCCGAGGTGA TTGGACGCCG CGATCTGTTC ATAAAAATAG CAGGATGATC
AGTGAAGCGA TAAAGCAACT TGAAGCACAA TTAGGCCGAG ATGTTTCTGA TGTTGAAGTT
GCTGAAAAAT TAGATATTTC ACTGAAAGAT TACCATCAGA TATTGAGTGA AGTAAGTACA
GGAAAAATAC TTGGTATTGA TGATCTTGGT GTTAATGAAG ATGCTATTAA GCCAAGTGAT
GACTATATTG GAGATGATCC ATATCAAAGT ATTGAGCGAA TAGCTTTTAA AAAAGGCTTA
ACTCAATGCA TTAAGTCTTT ACCGGAACGA GAAGCTCTAG TACTGTCTTT ATATTATGAT
GAAGAATTGA ATTTACGAGA GATCGGGCAA GTACTCGATG TGAGTGAATC ACGGGTAAGT
CAAATTCATA GTCAAGCGAT GCATCGTTTA AAAGCACGTA TGCAATCTTG GCAAAGTTAA
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| Protein sequence | MVKVNSYNNQ IDKAALLEQQ TVLVKRIAYH LLARLPASVQ VDDLIQSGMI GLFEAANNFD
NTKGASFETF AGIRIRGAML DEIRRGDWTP RSVHKNSRMI SEAIKQLEAQ LGRDVSDVEV
AEKLDISLKD YHQILSEVST GKILGIDDLG VNEDAIKPSD DYIGDDPYQS IERIAFKKGL
TQCIKSLPER EALVLSLYYD EELNLREIGQ VLDVSESRVS QIHSQAMHRL KARMQSWQS
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