Gene CPS_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1515 
SymbolflhB 
ID3521945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1556465 
End bp1557595 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content39% 
IMG OID637283978 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_268257 
Protein GI71281473 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.813027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT CTGATAGCGG TGAAAAAACG GAAGAACCCA CGGCAAAAAA ACTTACTGAC 
GCCCGTAAAA AAGGTCAAAT TGCTCGATCT AAAGATTTAG GTACATTTTT TGTTTTGGTC
GGTAGTGCTT GTGCCATGCT ATTAATGGGA AAGGCTTTAG CTAATTCAAT GGCTAATATG
ATGAGTCATA TGTTTAGCCT AAGTCGTGAA GAGGCCATGG ATGTAAATGC GCTTTTTAAA
GTAATAAATG ATGGTGTTTA TCAAATTATT CCCCCATTGC TTTGGATTTT CTTTATTGTA
ATGTTAGCTG CATTTATTGG TAATACACTA CTTGGTGGCA TGAGTTTTTC AGGGGATGCA
ATGATGCCAA AGGCAAGCAA GTTATCTCCG ATGGCGGGCT TTAAACGTAT GTTTGGCGTG
CAAGCCGCTG TTGAACTTAT TAAATCAGTT TTAAAGTTCT TTGTTGTTTT TATTGTTGCT
TTTTTACTGT TAAGTGGTTT GTTTGAGGAG ATTCTTGGCT TAAGTCGAGA AACTATTCCT
GCTAACTTTG AACATGCCAT AACTATGTTG CAGTGGATGT TCTTAGTGCT TGCTCTTTCA
ATAGGGATCA TTGTTGTTAT TGATGCGCCA TACCAAGTGT GGAATCACAA TCGCCAGTTA
AAAATGACCA AACAAGAAAT TAAAGATGAG CATAAGGGAA CAGAAGGTAG TCCTGAAATT
AAGGGGCGTA TTCGCCGAAC CCAATATGAA ATGTCGCAAC GTCGCATGAT GCAAGACGTA
CCTGAGTCTG ATGTAGTTAT TACCAACCCC ACTCACTTTT CTATTGCGCT TAAATATGAT
GCAGCTGCTG GTGGTGCTCC AGTATTGTCT GCAAAGGGCG TTGATGAGAT GGCTTTGCAT
ATTCGCACTA TTGCTAAAGA GCATCAAATA GAAATAATTC AATCACCGGC TTTAGCTCGT
TCACTCTATT ATACTGCCGA AGTTGGCGAT GATATTCCCG AAGAATTGTT TGCTGCAGTT
GCTCAAGTAT TAGCCTTTAT TTTTCAACTC AACGAACATA AAAAAGGTAA AGCTAAAAAG
CCAACACCCG TTGCTAAAGA GTTACCTATC CCTGATGATT TTAGATATTA G
 
Protein sequence
MADSDSGEKT EEPTAKKLTD ARKKGQIARS KDLGTFFVLV GSACAMLLMG KALANSMANM 
MSHMFSLSRE EAMDVNALFK VINDGVYQII PPLLWIFFIV MLAAFIGNTL LGGMSFSGDA
MMPKASKLSP MAGFKRMFGV QAAVELIKSV LKFFVVFIVA FLLLSGLFEE ILGLSRETIP
ANFEHAITML QWMFLVLALS IGIIVVIDAP YQVWNHNRQL KMTKQEIKDE HKGTEGSPEI
KGRIRRTQYE MSQRRMMQDV PESDVVITNP THFSIALKYD AAAGGAPVLS AKGVDEMALH
IRTIAKEHQI EIIQSPALAR SLYYTAEVGD DIPEELFAAV AQVLAFIFQL NEHKKGKAKK
PTPVAKELPI PDDFRY