Gene CPS_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1509 
SymbolfliM 
ID3518399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1552287 
End bp1553351 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content39% 
IMG OID637283972 
Productflagellar motor switch protein FliM 
Protein accessionYP_268251 
Protein GI71278806 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.361496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGACT TATTATCCCA AGACGAAATT GACGCCCTAT TACATGGTGT TGATGATGTT 
GAAGAAGAAG ACATAGTTGA GGATGTCGTG CAATCGCGAG ATGGCACCTC TGATTATGAT
TTCTCTTCAC AAGATCGTAT TGTGCGTGGT CGTATGCCTA CGTTGGAAAT GGTTAATGAA
CGTTTTGCTC GTCATATGCG CATTAGCTTA TTTAATATGA TGCGTCGGAC TGCTGAAGTA
TCTATCAATG GCATCCAAAT GATAAAATTT GGTGAGTACA TACATACCCT GTTTGTACCT
ACCAGCTTAA ATATGGTGCG ATTTCGTCCT TTAAAGGGGA CCGCTTTAAT CACCATGGAA
GCGCGTTTAG TTTTTATTTT GGTAGATAAT TTCTTTGGTG GTGATGGACG TTATCACGCT
AAAATAGAAG GCCGTGAATT CACGCCGACA GAGCGTCGTA TTATTCAAAT GCTATTAAAG
CTTGTTTTTG AAGATTATAA GGAAGCTTGG TCACCAGTGA TGGATGTCTC TTTTGAATAT
TTAGATTCAG AAGTTAACCC GTCAATGGCA AATATTGTTA GCCCAACTGA AGTGGTGGTT
ATCAGTTCTT TTCATATTGA ATTAGACGGC GGCGGTGGCG ATTTCCATAT CGCATTACCT
TATTCTATGC TCGAGCCGAT CCGTGAATTG CTTGATGCAG GTGTGCAAAG TGATAAAGAA
GATACTGATA TGCGCTGGTC TAAAGCGCTA CGTGATGAAA TTATGGATGT ACCTGTTACC
ATTAACACTA AGTTTATTGA GGTTGATATC TCATTAAGTC AAGTGATGGA GTTACAGGCA
GGGGATATTA TACCGATTGA AATGCCTGAT AATATTACGG TGCTAATTGA AGACTTACCA
ACCTTTAGAG CTAAATTAGG TCGTAGTCGA GATAATATAG CATTGAAAAT TGAATCGAAA
ATTAGGCGAC CAGAGTCAGC TAAATCTGAA CTAACTATCT TAACTAAAGG TGGTAAACGC
CTTGATAGTG ATGCAGAACT TCATCTGTTA GAAGATGACT TGTAA
 
Protein sequence
MSDLLSQDEI DALLHGVDDV EEEDIVEDVV QSRDGTSDYD FSSQDRIVRG RMPTLEMVNE 
RFARHMRISL FNMMRRTAEV SINGIQMIKF GEYIHTLFVP TSLNMVRFRP LKGTALITME
ARLVFILVDN FFGGDGRYHA KIEGREFTPT ERRIIQMLLK LVFEDYKEAW SPVMDVSFEY
LDSEVNPSMA NIVSPTEVVV ISSFHIELDG GGGDFHIALP YSMLEPIREL LDAGVQSDKE
DTDMRWSKAL RDEIMDVPVT INTKFIEVDI SLSQVMELQA GDIIPIEMPD NITVLIEDLP
TFRAKLGRSR DNIALKIESK IRRPESAKSE LTILTKGGKR LDSDAELHLL EDDL