Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1501 |
Symbol | fliE |
ID | 3519890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1543263 |
End bp | 1543625 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283964 |
Product | flagellar hook-basal body complex protein FliE |
Protein accession | YP_268243 |
Protein GI | 71279432 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1677] Flagellar hook-basal body protein |
TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.814922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATCA AAAGTAACTC TCTATACAGC CAAATGCAAA ACATGTCGCT ACAGGCCATG GGCAATAAGC CACCAGCAAT TGATGTTGAT GTTATAAACG GTACTGCAAG CAATAGCGTT GGCAAAATCA ATGAATCTAC CAGTAATTTT GGCGATATGC TTACCGATGC ACTCAAGAGC GTCAATGATT TACAAACAGA GTCTGGCGAA AAGAAAAGGG CTTTTGAAAT GGGCGATAGT AACGTTACGC TTGCTGAAGT AATGATTGCT TCTTCTAAAT CAGGTATCGC TTTGGATGCA ACCGTGCAAA TACGAAACAA ATTTGTTGAA GCCTATAAAG AAATAATGAG CATGCCAGTT TAA
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Protein sequence | MDIKSNSLYS QMQNMSLQAM GNKPPAIDVD VINGTASNSV GKINESTSNF GDMLTDALKS VNDLQTESGE KKRAFEMGDS NVTLAEVMIA SSKSGIALDA TVQIRNKFVE AYKEIMSMPV
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