Gene CPS_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1501 
SymbolfliE 
ID3519890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1543263 
End bp1543625 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content39% 
IMG OID637283964 
Productflagellar hook-basal body complex protein FliE 
Protein accessionYP_268243 
Protein GI71279432 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.814922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCA AAAGTAACTC TCTATACAGC CAAATGCAAA ACATGTCGCT ACAGGCCATG 
GGCAATAAGC CACCAGCAAT TGATGTTGAT GTTATAAACG GTACTGCAAG CAATAGCGTT
GGCAAAATCA ATGAATCTAC CAGTAATTTT GGCGATATGC TTACCGATGC ACTCAAGAGC
GTCAATGATT TACAAACAGA GTCTGGCGAA AAGAAAAGGG CTTTTGAAAT GGGCGATAGT
AACGTTACGC TTGCTGAAGT AATGATTGCT TCTTCTAAAT CAGGTATCGC TTTGGATGCA
ACCGTGCAAA TACGAAACAA ATTTGTTGAA GCCTATAAAG AAATAATGAG CATGCCAGTT
TAA
 
Protein sequence
MDIKSNSLYS QMQNMSLQAM GNKPPAIDVD VINGTASNSV GKINESTSNF GDMLTDALKS 
VNDLQTESGE KKRAFEMGDS NVTLAEVMIA SSKSGIALDA TVQIRNKFVE AYKEIMSMPV