| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1432 |
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| Symbol | mmsA2 |
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| ID | 3519748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1469561 |
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| End bp | 1471057 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637283896 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_268175 |
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| Protein GI | 71278069 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTA TTGGACATTT AATTAACGGT GAAATTTGTA CCGACGCCGC CCGCACTCAA
GATGTGTTTA ACCCTGCAAC GGGGGAAGTG ACTCGACAAG TTGCCTTGGC TTCTGTCGAA
ACAGTAGAGC AAGCAATAAC TGCTGCACAA GCTGCCTTTC CACAATGGCG AAATACTCCA
CCTATCAAAC GTGCACGAGT GATGTTTCGT TTTAAAGAGT TGTTGGAAGC AAACTCAGAT
AAAATATGCG AAATGATAGG CGAAGAGCAT GGAAAAATCT CGCATGATGC AGCCGGTGAA
TTACAACGAG GTATCGAGAA CGTTGAATAT GCTTGTGGCG CGCCAGAGTT ATTAAAAGGT
GAGCACAGTA AAAATGTTGG ACCAAACATT GATTCATGGA GTGAATTTCA ACCCTTAGGT
GTTGTTGCCG GTATCACACC ATTTAACTTT CCAGCGATGG TTCCATTGTG GATGTTCCCA
ATGGCGATTG CCTGTGGTAA CTGTTTCATA TTAAAACCGT CAGAACGCGA TCCAAGTTCA
ACGTTATTTA TTGCTCAGTT ATTAAAAGAA GCTGGATTAC CAGATGGCGT AATGAATGTT
GTTAATGGCG ATAAAGTTGC GGTTGATGTG TTGTTATCTG ACCAGCGAGT AAAAGCGGTT
AGTTTTGTTG GCTCAACGCC AATTGCCGAA TATATTTATG CCACGGCTAA TGCCAATGGC
AAACGTTGCC AAGCATTAGG TGGTGCAAAG AATCACGCTA TCGTGATGCC TGATGCTGAT
ATGGATAATG CGGTTAATCA ATTGTTGGGC GCAGCATTTG GTTCATCGGG TGAGCGTTGC
ATGGCATTGT CTGTTGCGGT TGCAGTAGGT GACGTTGCCG GTGATGCCTT AATTACTAAA
ATGACAGCCG CAATGGCAAG CCTTAAAGTA GGTGCATTTA GCGATAGCAC TAACGATTTT
GGTCCAGTTA TTACCAGCCA GCATCGTGAC AAAGTGGTTG GTTATATTAA TCATGCCCAA
GAGCAGGGCG CAACTATTGT CGTTGATGGT CGCAATCCTG AGGTTGAAGG CTACAATAAT
GGCTTCTTTG TCGGTGGCAC CTTAATCGAT AATGTCACGG CCGATATGGT GAGCTATAAA
GAAGAGATCT TTGGTCCGGT ACTGCAAGTG GTACGCGTGC AAACGATGCA GCAAGCTATG
GATTTAATTA ATGACCATGA GTACGGTAAT GGTACTTGTA TCTTTACGCG TGATGGCGAA
GCGGCTCGAT ACTTCTCTGA CAACATTCAA GTAGGTATGG TTGGTATCAA TGTGCCGTTA
CCCGTGCCTG TTGCATACCA TAGTTTTGGT GGCTGGAAGC GTTCGTTGTT CGGTGATTTA
CATGCTTACG GTCCAGATGC GGTTCGCTTC TACACCAAGC GCAAAACAAT TACCCAACGC
TGGCCTTCAG CAGGTGTTCG TGAGGGCGCA GAGTTCTCAA TGCCAACGTT GAGTTAA
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| Protein sequence | MNIIGHLING EICTDAARTQ DVFNPATGEV TRQVALASVE TVEQAITAAQ AAFPQWRNTP
PIKRARVMFR FKELLEANSD KICEMIGEEH GKISHDAAGE LQRGIENVEY ACGAPELLKG
EHSKNVGPNI DSWSEFQPLG VVAGITPFNF PAMVPLWMFP MAIACGNCFI LKPSERDPSS
TLFIAQLLKE AGLPDGVMNV VNGDKVAVDV LLSDQRVKAV SFVGSTPIAE YIYATANANG
KRCQALGGAK NHAIVMPDAD MDNAVNQLLG AAFGSSGERC MALSVAVAVG DVAGDALITK
MTAAMASLKV GAFSDSTNDF GPVITSQHRD KVVGYINHAQ EQGATIVVDG RNPEVEGYNN
GFFVGGTLID NVTADMVSYK EEIFGPVLQV VRVQTMQQAM DLINDHEYGN GTCIFTRDGE
AARYFSDNIQ VGMVGINVPL PVPVAYHSFG GWKRSLFGDL HAYGPDAVRF YTKRKTITQR
WPSAGVREGA EFSMPTLS
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