Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1427 |
Symbol | rstB |
ID | 3520015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1464060 |
End bp | 1465379 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283891 |
Product | sensor protein RstB |
Protein accession | YP_268170 |
Protein GI | 71279556 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAATT TGACACTTTC ATTAGTCGCC GTGGTGCTTA TCGCAACCAT AGGTTTAGGT TGGATGTTTG ATAGTATTTA TAACCAATAC CTCAACCAAA ACCTCGATCA AAGTACTGCG CAATCTAATC AAGAAACGAG TGGCCAGCAG AGTGTCATTG ATACGTTAGA GCAAGTAGGC ACTCACTTAT CAATCGCACT CTCTGGTATT GATAATCGTC AAGAATTTAT CCAACAATGG CCGAGTGAAG GGACATTGTC ATTACGTTTG AAACCGTTAA CGAATTTCCC CCTACCGCAA CCGTTACTCA CCGACTTAGT AGCAGGGCAG CCGTTATTAC TTGAAACCGA TGATAGTATC GCCATGCATT TTTATCTGCC AGCTACGGAT GAACTTTTAG TGCTCACAAC TCCCCCGGTA ACGGTTCATC AAAATAACTC ATTTTTACCC ATTTTACTGA CCAGTCTATT TTATCTAGCC GTACTGTTAT TAATGTTGCT TTGGCTTTAT CCGCTAATGA GAAGGTTAAT GACTTTGCGT CAAACGGCCA AGTCATTTGG TGAAGGTAAT TTAAACCAAC GTATTGATGT TGGCTCTATT TCGTATATTC GTGATTTAGA ATTAGAGTTC AATCGCATGG CGCAGCGTAT CGATGATTTA GTGACTGACA TAAAACTGCT TAGTAGTGCC GTTTCTCATG ATTTACGCAC ACCGCTTGCA CGTATCCGCT TTGGCATTGA TACCATTCAA GAAGAAGATG ACCCTGTCTT GCGAAAACGT TTTGAGCAGC GCATTAGTGA TAACGTTGAT GAAATGGTCG ATTTGGTAGA GAGCTTATTG AGTTATGCGC GTTTAGACCA AACCTTAATT ACTATACACA AAGCGCCAGT TGATTTTTCA GCACTGACGG CGACTTGTAT TAAAAACAAA AGTCAGGATG ATGTTCAACT AACTTTTGAG GCACCAAAGC AAGCGGTATT CGTTGATGGT GACCTCTCCT ATTTGATGAT TTTGATGAGT AACTTATTAC AAAACGCCCA TCAGTATTGC AAAGGAAAAA TAGCGGTTAA AATAATAGCG CAAGACAGTA ATATTGTTAT AACGGTTGCT GACAATGGAC CTGGGATCCC GATAGATCAA AGAGAAAAAA TTCTTAAACC TTTTATTCGC GGAGAAAGTA CGGAGAAAAA AGTGAAAGGC TACGGAATGG GCCTTGCCAT CGTTAAGCGA ATTGTTGAGT GGCACAACGG CGAGATTATT ATTGAAAACT CAGCTGAGTT ACAAGGCGCT CAATTTAGTG TGACCTTACC CAAAGCGTAA
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Protein sequence | MRNLTLSLVA VVLIATIGLG WMFDSIYNQY LNQNLDQSTA QSNQETSGQQ SVIDTLEQVG THLSIALSGI DNRQEFIQQW PSEGTLSLRL KPLTNFPLPQ PLLTDLVAGQ PLLLETDDSI AMHFYLPATD ELLVLTTPPV TVHQNNSFLP ILLTSLFYLA VLLLMLLWLY PLMRRLMTLR QTAKSFGEGN LNQRIDVGSI SYIRDLELEF NRMAQRIDDL VTDIKLLSSA VSHDLRTPLA RIRFGIDTIQ EEDDPVLRKR FEQRISDNVD EMVDLVESLL SYARLDQTLI TIHKAPVDFS ALTATCIKNK SQDDVQLTFE APKQAVFVDG DLSYLMILMS NLLQNAHQYC KGKIAVKIIA QDSNIVITVA DNGPGIPIDQ REKILKPFIR GESTEKKVKG YGMGLAIVKR IVEWHNGEII IENSAELQGA QFSVTLPKA
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