Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1407 |
Symbol | |
ID | 3519179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1446485 |
End bp | 1446970 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637283871 |
Product | universal stress protein |
Protein accession | YP_268150 |
Protein GI | 71278221 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.192272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGAAA TCAATACAAT ATTATATGCA ACTGATCTTG GTAAACATAC AAGACCTGCC TTTCGTATGG CGGTAAGTCT TGCCAAAAGC AATAATGCAA AAATTCATTT TCTCTATGTA ATAGAGCCAT TGAATACTAA TACCGCATCA CTGGTTAACT CGTATCTACC TGAAGGGACT ATAGAAGATA TATACCAGCG CTCAATTGAT GAATTGCATG AGAAAGTTAA GAATCGCATT GATAAGTTTT GCTTAGAAGA ATTAGACGGT GAAGAATTTC CTGGTGGTAA ACCTGTAGCA GATATTATTG AAGGTTCTCC TGCCGCGACC ATTGTTAGTT TCGCAGAAGA TAACAATGTT GATCTTATTG TAATGGGCAG TCACGCACAT AGCGTATTAA ATAATCTGTT TATCGGTTCA GTCGCAGATA AAGTAGTGAA TAGAACAGCT ACTCCGGTAT TACTAGTACC ACTCAAAAAT GATTAG
|
Protein sequence | MTEINTILYA TDLGKHTRPA FRMAVSLAKS NNAKIHFLYV IEPLNTNTAS LVNSYLPEGT IEDIYQRSID ELHEKVKNRI DKFCLEELDG EEFPGGKPVA DIIEGSPAAT IVSFAEDNNV DLIVMGSHAH SVLNNLFIGS VADKVVNRTA TPVLLVPLKN D
|
| |