| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1375 |
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| Symbol | |
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| ID | 3522871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1415210 |
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| End bp | 1417045 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283839 |
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| Product | putative adhesion lipoprotein |
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| Protein accession | YP_268118 |
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| Protein GI | 71282397 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATATT TTAAAATACT AAGTGTAACC GTATTAAGTG TGTTTTTATT GCAAGGTTGC
AATGACGACG ATAATGACGT AATTGAACAA GTCAAACAAG ATGTAGTTGC ACCAACTACG
ATTGTTGATG CTGCTGTTAA TGACGGCAGT TTCACTACTT TAGTTGCTGC TTTACAAGCG
ACAGGGCTAG ATACAACCTT GGCAGATACC AGTGCGAAAT TTACCGTTTT TGCGCCAACG
GATAAAGCCT TTGCTTTGTT GGGGCAAGGT ACCATTGATG CGCTGCTGGC TGATACTGAT
AAGTTATCAG ATATTTTAAC CTATCATGTT ATTAGTGGTG AAGTTGATGC CGCAGCAGCT
ATAGCGCTAG CTGGGACAAC CGTTGATATG GTGAATGGTG ATGCCGTAGG TTTATCACTC
GATGGTGAAA AATTATTGGT AAATACCGCC ACAGTAATTA CCACTAACAT TCAGACTGAT
AATGGTATTA TTCACGTTAT CGATGCTGTT TTACTCCCAC CCGCAGAAAT GATGGAGCCG
ACATTGAGTA TTGTCGAAGT AGCACTGGCT GATCCTGATA ATTTCTCTAC CTTAGTTGCC
GCGCTTAGTG CTGCTGATTT AGTGACTACC TTGTCAAATG AAGATGCTAC CTTTACTGTT
TTTGCTCCGA CTAATGCCGC ATTTGCTTTA ATTGCAGGTG ATACCTTGAC TGCATTGTTA
GGTGATACCG ATGCCTTAAC AAAAGTACTA CTGCAACATG TTATAGCAGA TGCTGCTGTA
AATTCGGTTA ATGCCTACGC CTTGAGTGGC AATATGGTTG ATACAGCGGG TATGGATAAA
ATAGCACTTA ACATCAACAT GGACACAGAT AAGCTATTGT TTGGTGGTGC CAATGTTGTG
ATGAAAGATA TTTATACAAC CAACGGCATT ATCCATGTGA TAGATGCGGT AATTATTGGT
GATGTGGCAT TACCAAAACC GAGCATGAGC TTAGTTGATA TTGCCAGTAG CAACAGTGAT
CTATCGACAC TAGTGTCAGC GTTGCAATCA ACAGGCCTAG ATACCGTCTT AGCTAACCTT
GATAATGACT ATACTGTTTT TGCTCCAACT AATGCCGCTT TTGCTAAATT ACCTGCTGGC
ACAGTTGAAG GATTAACTAG CGAACAATTA AGTAACATAT TGCTATATCA CGTAATCGCT
GGCGAAGTTC TTGCTGATGG CGCTATCAAC TTAGCTCAAT CTATGGATAA CATGGCAGAA
ATGGCGAATG CGAGTAAAGC CGCTGTATCG TTCACTGATG GCATGCTTTT CATTAATGGC
GCTAAGGTAA GTGCAGCTAA TGTTATGGCT GCAAATGGTG TTGTTCACTT AATTGATAAT
GTGATTATGC CTCCTGCAAT GATGGGTACG CCAACATTGA ATATTGTTGA AGTCGCTTTG
GCAGACCCGG ATAATTTTTC TACCCTAGTA ACCGCACTTA CTGCTGCTGA TTTAGTGACT
ACTTTATCAA ACGAAGATGC TATGTTTACT GTTTTTGCTC CAACTAATGC CGCCTTTGAT
AAGATTGACA GTGAAGCTTT AACCGCTTTA TTAGCAGACA CTGAGATGCT TACTAAAGTC
TTATTAACTC ATGTTGTGGG TGAAAGTAGC TTAAGTTCTA CAGATGCTTA TGCAAAAAAT
GGACGTTCAT TAACCACAGC ATCGGATGTA ATGATTGATG TGAGTATTGA CGCTGATACG
GGAATGCTGA TGATTGGAGG AGCTAAAGTA ATTATCTCTG ATATCTACAC AACAAACGGT
GTTATTCATG TAATCGATAC CGTGATTATG GAATAG
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| Protein sequence | MKYFKILSVT VLSVFLLQGC NDDDNDVIEQ VKQDVVAPTT IVDAAVNDGS FTTLVAALQA
TGLDTTLADT SAKFTVFAPT DKAFALLGQG TIDALLADTD KLSDILTYHV ISGEVDAAAA
IALAGTTVDM VNGDAVGLSL DGEKLLVNTA TVITTNIQTD NGIIHVIDAV LLPPAEMMEP
TLSIVEVALA DPDNFSTLVA ALSAADLVTT LSNEDATFTV FAPTNAAFAL IAGDTLTALL
GDTDALTKVL LQHVIADAAV NSVNAYALSG NMVDTAGMDK IALNINMDTD KLLFGGANVV
MKDIYTTNGI IHVIDAVIIG DVALPKPSMS LVDIASSNSD LSTLVSALQS TGLDTVLANL
DNDYTVFAPT NAAFAKLPAG TVEGLTSEQL SNILLYHVIA GEVLADGAIN LAQSMDNMAE
MANASKAAVS FTDGMLFING AKVSAANVMA ANGVVHLIDN VIMPPAMMGT PTLNIVEVAL
ADPDNFSTLV TALTAADLVT TLSNEDAMFT VFAPTNAAFD KIDSEALTAL LADTEMLTKV
LLTHVVGESS LSSTDAYAKN GRSLTTASDV MIDVSIDADT GMLMIGGAKV IISDIYTTNG
VIHVIDTVIM E
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