Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1354 |
Symbol | |
ID | 3522031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1393776 |
End bp | 1396001 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283818 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_268097 |
Protein GI | 71281559 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.945441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCAA AAATAATTTA CACCTATACC GATGAAGCAC CACTGCTAGC GACCTGCTCG TTACTGCCGA TTATTAAAAC TTTTGCAGCA TCTGCAGACA TAGATATTGA ACTAAAAGAT ATATCTCTTG CGTCTAGGGT TTTATCTGCC TTCTCCGATA TTTTACCTGC AGATCAACAA GTACCTGATA CATTAGCCGA ACTAGGTGCC TTAACTCACC ACCCTGATAC TAATATCATC AAACTCCCCA ATATCAGTGC TTCAATTCCT CAACTAAAAG ACGTTATCAG TGAATTACAA GCACAAGGTT ACGCTATTCC TGATTATCCA GAATCGCCAA AAACAGATGA AGATAGATCA AATGAAGCTA AATATTCAAA AACCTTAGGC AGTGCGGTAA ATCCAGTACT TCGTGAGGGT AATTCTGACC GCCGCGCTCC ACCGTCGGTG AAAGCTTTTG CCAGAAAAAA TCCACATTCC ATGGGTAAGT GGAGTCAAGC ATCAAGAACC CATGTATCGC ACATGCATTC AGGCGATTTT TATGCCAGTG AAAAGTGTAT GACTATGGAT AAAGCCTGTG ATGTAAAAAT TGAGTTTGTC GCTAAAGATG ATGGTGCAGT GACGGTATTA AAAGAAAAAA CCTCACTTCA GGCAGGTGAA ATCATTGACA GTATGTTTAT GAGTAAAAAG ATCCTCTGTG AATTCTTAGA GCAAGAGATG GAAGATGCGA GAGAAACCGG GGTGATGTTC TCCTTCCATG TCAAAGCGAC CATGATGAAA GTATCGCATC CCATTGTGTT TGGCCACGCG GTTAAAGTTT ATTATAAAGA TTTGTTTGCT AAGCACGCTG AAACCTTTGA AAAATTAGGT GTTAATGCCA ATGATGGTGT CAGCAGTATC TATGAAAAAG TAAAACAATT GCCTGAATCT TGGCGTGAAG AAATATTGGC CGACTTACAT GCTTGTTATG AAAAACGTCC TGAATTAGCA ATGGTCGACT CAGCTAAAGG TATTTCAAAC TTACATACCC CAAATGAGGT TATTGTCGAT GCTTCAATGC CTGCGATGAT TAGAGCGGGC GGAAAAATGT GGGGGCCTGA TGGTAAATTG AAAGATACTA AGGCGGTGAT GCCAGAGAGT ACTTTTGCAA GAATTTACCA GGAAATCATT AACTTTTGTA AAACTCACGG GGCATTTGAT CCTACAACCA TGGGAACCGT GCCAAACGTA GGATTAATGG CTCAAAAAGC AGAAGAATAT GGTTCACATG ATAAGACATT CGAAGTACAG GGGGATGGTT GTATTCGCAT TGTTGATGAC GAAGGAAAAA CGTTATTAAC CATGGATGTT GAAGAGGGTG ATATTTGGCG GATGTGCCAA GTAAAAGATG CACCGATACA AGATTGGGTC AAATTAGCCG TTGCCCGTGC AAAGTTGTCT GATACCCCAG CGGTATTCTG GTTAGATGAA TACCGTCCAC ATGAAGCTGA ATTGATTAAA AAAGTTAAAC TGTACCTGAA AGATCATGAT TTGACCGGAT TAGATATTCA AATAATGTCA CAAACTAGAG CGATGCGTTA TACGCTAGAG CGTATTTTAC GTGGTGGGGA TACCATCTCT GTTACGGGTA ATATTCTGCG TGATTACTTA ACCGATTTAT TTCCGATCTT AGAGTTAGGT ACAAGTGCCA AAATGTTATC CATAGTGCCA TTAATGGCGG GTGGCGGTTT ATTTGAAACA GGGGCAGGCG GATCAGCACC TAAGCATGTT AAGCAGCTAA TAGAAGAAAA TCATTTACGA TGGGATTCTC TTGGTGAATT CTTGGCGATA AGTGCTTCTC TTGAAGATTT AGGTATCAAA CAAGACAGCG CTAAAGCAAA ACTACTGGCA AAAACATTAG ATCAAGCAAC TGCTGAGTTA TTGGAAAATG GCAAATCTCC GTCTCGTAAA ACCGGAGAGC TAGATAATCG TGGCAGTCAC TTCTACTTAG CACTTTACTG GGCAAAAGCG TTGGCAGAGC AAACTGAGGA TACTGAACTT CAACACCACT TTGCACCATT AGCTCAATCA TTAACTGAAA ATGAAGCCGC TATCGTCAGT GACTTAACAA CAGATCAATG GCATTCCGTT GATATTGGTG GTTATTACAA AGCAGATGCT AAAAAGATTA TTGAAATAAT GCGACCGTCG AAATGCTTTA ATGAGGTATT AGCAGCATTT AAATAA
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Protein sequence | MSSKIIYTYT DEAPLLATCS LLPIIKTFAA SADIDIELKD ISLASRVLSA FSDILPADQQ VPDTLAELGA LTHHPDTNII KLPNISASIP QLKDVISELQ AQGYAIPDYP ESPKTDEDRS NEAKYSKTLG SAVNPVLREG NSDRRAPPSV KAFARKNPHS MGKWSQASRT HVSHMHSGDF YASEKCMTMD KACDVKIEFV AKDDGAVTVL KEKTSLQAGE IIDSMFMSKK ILCEFLEQEM EDARETGVMF SFHVKATMMK VSHPIVFGHA VKVYYKDLFA KHAETFEKLG VNANDGVSSI YEKVKQLPES WREEILADLH ACYEKRPELA MVDSAKGISN LHTPNEVIVD ASMPAMIRAG GKMWGPDGKL KDTKAVMPES TFARIYQEII NFCKTHGAFD PTTMGTVPNV GLMAQKAEEY GSHDKTFEVQ GDGCIRIVDD EGKTLLTMDV EEGDIWRMCQ VKDAPIQDWV KLAVARAKLS DTPAVFWLDE YRPHEAELIK KVKLYLKDHD LTGLDIQIMS QTRAMRYTLE RILRGGDTIS VTGNILRDYL TDLFPILELG TSAKMLSIVP LMAGGGLFET GAGGSAPKHV KQLIEENHLR WDSLGEFLAI SASLEDLGIK QDSAKAKLLA KTLDQATAEL LENGKSPSRK TGELDNRGSH FYLALYWAKA LAEQTEDTEL QHHFAPLAQS LTENEAAIVS DLTTDQWHSV DIGGYYKADA KKIIEIMRPS KCFNEVLAAF K
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