| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1347 |
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| Symbol | |
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| ID | 3520991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1385199 |
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| End bp | 1387661 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283811 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_268090 |
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| Protein GI | 71280525 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.475888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAACAAT TTCGTTTTTC ACTACTTGCT GTCGCATGTG CATCAGCACT TTTTTCTGGT
TTTATTTCTG CTAACGAGCA AAATAAATCA GCGGAAGCAG TGCAAGAAAA AAAATTGAAA
AACAAGGATG TAGAACTTAT CACTGTCTAT GGAAGACAAA ACCAAGTGGT TATGAATTCA
GGCTTAGCAA CCAAGTCAAA TATGTCGTTA ATGGAAACAC CAGCGGCTGT GGTGATCGTA
GATGAAGAGC TAATTAACGC GCAAGGTGTT AATAACCTAC AAGACTTAGT GCGTAATATT
AGTGGTGTTA CTCAAGCGGG AAACAATTAT GGCATTGGTG ATAACATAGT TATTCGAGGG
CTTGGTGCTA ACTATACTTA TGATGGTATG TACGGTGGAG CAGGGCTTGG CAATACCTTT
AACCCAACGC GCTCGTTAAC TAATGTTGAA TCTGTCGAGG TACTTAAAGG CCCTGCGACT
GGCTTGTATG GCATGGGTAG TGCCGGTGGT GTCATTAATT TAATTGAAAA AAAACCTGAG
TTTATTAGCA GCCATGAGAT CACCGCTGAA CTAGGACAAT GGGATACATT TGCATTAAGT
ATTGATAGCA CTGGCGGATT AACGGATAAA TTGGCTTATC GTATTGTAGC AAAGTCTGCA
CGCAGTGATG GTTATCGCGA TATTGGCACA GACCGTGATG AGATTTACAG TTCACTCAAA
TATGTTTTTG ATGAACGCCA AGATTTAATG TTATCTGCTT CGTATATAAA AGATGCTATT
GCCGTTGATT CTGTTGGTCA TCCTATTCGT ATTTATAATG CCGAGTCGGT GGGTGGTAAA
ACTGCTGGCG AAGTAAGTTG GCAAGATTTG ATTAACGACC CTGAAGGTAA AGGCATTCAA
CTTAGTGATG CTCAGCGACA GCAATTAGCG GGGTCTTTAG CTGATAGTGA TGGTTTAACT
CCGTATGAAT TCGGTCATAA TGGCATCATT TCACCCATGG CTAAAGATAA TGAAGGTGAA
GAGTTAAGGT TTAAGTTAAC TCATAATTAC TTTTTCAACG ATAACCTTTT TTTAAATCAG
CAATTACAGT ACCGCGATTA TACTTCTGGC TTTGCGCGTC AAACCGGTGC TTATAATTAT
GTTTATTGGA ACCGTGGTGG CACTATCAAT GCCAATCCTC GCGCACCTTT AGTTGAAGAT
GATGTACTTT ATCCCTTTGC TGCTCGCCGA CAAGAATATC GAAAAGTTGA AGCGGATGAA
ACGTCTTTGC AGTATTTTGC AGATTTACGC TATGACTTCG AGTTTGCTGG CATCGACAAT
GAATTATTGT TAAACGCCAA CTATGAAGAT AGAGATATCC GTTTTAAACA ACATTCAATA
TATGATGCCG ATAAGGTACT TACAAATAAA GCGGGTGACG TGACTTACCA AGGCACTTTA
CCTTATATTT ACGACATTCG TAATCCTAAT TGGGCTGAAG GTTCATTTGA AGATCATGAT
CCCTTGATGA CCAGTAACTA TAATAAAAAA GTTAGTGCAT GGGGTGTTGG AGTTCAACAT
GTGGGTTACT TTGGTTATGG TTTCTCTACC CGCGTAGGCG TGGCATTTAA CGAAATTAAA
CAAAGCTATG AACATTTTGG TGTTGATGCA CGCTATCGTG CTAGTGCCGC AGCGCCGACA
TCTGAAGCAG ATACTAATGA TGATGGTATT ACCTACAATT TAGGTGTGAC TTATATGCCG
ACCGATGATC TCTCTTTCTT CATTAATCAC TCAAAAGGTC GAACCGCCTA CAGTATGTTA
GGTGGTGTGA AAGGTGATGG CTCTGATCGA TTAGACTCTG AATCGATGAG TGATGATTTA
GGTATGCGTA TTAAAGCCTT TGATGATCAA ATGTTAACTT CTATCGTTTT CTTTAAAAGT
TCTCGTACAA ACTTGCAGTA TTCAAATCCT GAGTACGATG ATGGCGTGTC AACGCCGAAT
GTGCCAAAAA GTTTTTTTGA TGGTAAAGAA GAAACGACCG GTGTTGAGTT AGATATGAAT
GCTCATCTGA ATGAGCGTTG GATGATCAAT ATCAATGGTG TTTATCAAGA TGCTCGCGAT
AAGAAAGATC CAAACCGAAG TAGTTATGAT ACTCGTCAAA AGGGCGTTCC TTATGTAACG
GCCAGTACTT GGGTAACTTA TAGCGCAGAT ATATTTTCAC TTGCTAGCCC AATAGATCTC
AGTTTGGGGG GTAAATATGT TGATGATCGT AGTACAAATA CGAGCTCCTT TGGTATTCCT
GATGGTTACG TGCAAAGTTA TACTGTGGTT GATTCTGCTG TAAGTTATCA GGCGGAAAGT
TGGAAGCTAC AATTGAACAT TAATAACCTG TTCGATGAAG TTTACTATAA CAAAGCAATG
TTCTTGGGTG GTATGCCTGG CGAAGAACGT AATGCTAAAC TGACCTTTAG TTATCAAATA
TAA
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| Protein sequence | MQQFRFSLLA VACASALFSG FISANEQNKS AEAVQEKKLK NKDVELITVY GRQNQVVMNS
GLATKSNMSL METPAAVVIV DEELINAQGV NNLQDLVRNI SGVTQAGNNY GIGDNIVIRG
LGANYTYDGM YGGAGLGNTF NPTRSLTNVE SVEVLKGPAT GLYGMGSAGG VINLIEKKPE
FISSHEITAE LGQWDTFALS IDSTGGLTDK LAYRIVAKSA RSDGYRDIGT DRDEIYSSLK
YVFDERQDLM LSASYIKDAI AVDSVGHPIR IYNAESVGGK TAGEVSWQDL INDPEGKGIQ
LSDAQRQQLA GSLADSDGLT PYEFGHNGII SPMAKDNEGE ELRFKLTHNY FFNDNLFLNQ
QLQYRDYTSG FARQTGAYNY VYWNRGGTIN ANPRAPLVED DVLYPFAARR QEYRKVEADE
TSLQYFADLR YDFEFAGIDN ELLLNANYED RDIRFKQHSI YDADKVLTNK AGDVTYQGTL
PYIYDIRNPN WAEGSFEDHD PLMTSNYNKK VSAWGVGVQH VGYFGYGFST RVGVAFNEIK
QSYEHFGVDA RYRASAAAPT SEADTNDDGI TYNLGVTYMP TDDLSFFINH SKGRTAYSML
GGVKGDGSDR LDSESMSDDL GMRIKAFDDQ MLTSIVFFKS SRTNLQYSNP EYDDGVSTPN
VPKSFFDGKE ETTGVELDMN AHLNERWMIN INGVYQDARD KKDPNRSSYD TRQKGVPYVT
ASTWVTYSAD IFSLASPIDL SLGGKYVDDR STNTSSFGIP DGYVQSYTVV DSAVSYQAES
WKLQLNINNL FDEVYYNKAM FLGGMPGEER NAKLTFSYQI
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