Gene CPS_1336 details

Gene Information

• Locus tag: CPS_1336
• ID: 3518350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1373958
• End bp: 1374662
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283800
• Product: hypothetical protein
• Protein accession: YP_268079
• Protein GI: 71278757
• TIGRFAM ID: [TIGR02001] conserved hypothetical protein, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA TTATAATTGC AGCGGTAACA ACTGGTCTAC TAACTCTTTC TGCCTCTGCT 
TTAGCAGATG TATCTGCAAC GGTTAACCTA GCTTCAGATT ACACTTTTAA TGGTGTTAGC 
CAAACAGGTA ATGATCCAGC GCTACAAGGC AGCTTGGATT ATGCTGCTGA TAGCGGATTT 
TATGCAGGTA CTTGGGCGTC AAACGTTGAT TTTGGTTCTG GTGAAGACAC CAATATCGAA 
TGGGATGCTT ATGTTGGACA ATACTTTCAG CTTAATGACA AATTTGGGCT AGATACCGGT 
ATTGCGTATT ACACCTATCA TGGTGACTCT GCGTCTGATA CTTACAATTA CCCAGAAGCT 
TATGCAAAAT TAGGTTACAG CTCATCTATG GGAGATAGTG AATTAAACTT CTGGTACAGC 
TGGGATTATT TTGGTTTAGA TGTAAGTCAT TACATCGCTA TGGTTGCTCA CACAGTAGAA 
GTGGCACCTG GACATAACAT TAAAGTGAGT TTTGACCGCT CAACATCTGC TGATGAAGCT 
ATTTGGGCTT GGGATGGCAC AGATGCTTAC AATCATTACC GTGTTGAATA CATGACAAAT 
TGGAAAGGAT TTGATTTTGA CCTAGCCTTT GAAAACACCA ATATGGATAT TGATACGGCT 
GATGCTCGTG TAGTGTTTTC AATTTCTCGC ACATTTAGTT TATAA 

 

Protein sequence

MNKIIIAAVT TGLLTLSASA LADVSATVNL ASDYTFNGVS QTGNDPALQG SLDYAADSGF 
YAGTWASNVD FGSGEDTNIE WDAYVGQYFQ LNDKFGLDTG IAYYTYHGDS ASDTYNYPEA 
YAKLGYSSSM GDSELNFWYS WDYFGLDVSH YIAMVAHTVE VAPGHNIKVS FDRSTSADEA 
IWAWDGTDAY NHYRVEYMTN WKGFDFDLAF ENTNMDIDTA DARVVFSISR TFSL