| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1267 |
|---|
| Symbol | |
|---|
| ID | 3523084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1300181 |
|---|
| End bp | 1301854 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637283731 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_268010 |
|---|
| Protein GI | 71282609 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGT CACTTAGAGT ACAAATATAT GCACTAGCAT TTTTGCCGTT TTTATTTGTA
GCTATGCTGG GGTTGTATCT TCAATTTAGT TCACTTAAAA GTTTTGGTGA TGACGTCACT
ACGTTAACTG AAAAGACGAT ATTAACGATC GAAAAAGACC GTCTAAAAGC TATTATTGAT
TCTGTAGAAT CTCTTATTCA ACCTTATGTT AATCAATCAG GTACCGAAGG TTATGATGAT
GCATTAAAAA TGTTATCTCA CCTGACTTTC GATCAAGGCT CTGGTTATAT ATTTGCCTAC
AAAAATGATG GCGAAAGAGT ATTGATGGGA AATAAAACCG CAGGTATTGG GAAAAACTAT
TGGGACCTTC AAGACAAGCA AGGTCAATAT ATTATTCGAG ACTTAGTTAA TAAAAGTAGA
CAAGGTGGAA GCTTTTATAC TTATTGGTTC CCTAAACTAA ATGAAACTGA AGCTTCTCCT
AAATATAGCT ACGCCATTTA TATAGATAAA TGGGATTTAA TGATAGGAAC AGGATTTTAT
ATTGACTCTA TGGATACTGT AATAGCTTCT ATTGATGAAA CAATTTCTTC TTCTCAAAGT
AGCAATATTA CTAAAAGCCT GGTAACTACA TTGATTATTG CGCTAATTGT CGGTTTTATC
GTTACCTTTG CCATTAAACT CATTTACAGT GCCCTTAAAA ACTTATCATC ATCCGTGGAA
GCCTTAGCAA AAGGTGAAGG AAATTTAACG CAGACTATAG TAGATAGTCC TATTGATGTT
TTAAGTGATA TTGCGAATAA CTTCAATCGC TTTCTAAAAG CACTCGGTGG TGATATTCGT
AATATCAAGC AAACCAGTGT TAATTTAGCT GAGATGGCGG TTCAATCAAC AGAACGTCAA
CGTAGACTTG AAGATTCTTC AGATCAGCAA ATGCAAGAAA CGACACAAGT GGCTAGCGCT
GTTGAGGAAA TGGCATCAAC CTCAGCAGAA ATTGCTAATA GCGCCGAAGT AACGCGTACT
TCTGCTGAAA AGGCTGAAAT AGAAATGCAA AATGTTCTGA CGCAAGTGCA TTCTTCAAAT
CAGCGCATGA ACGAACTCAA TTTATTACTC GAAAATGTTG AACATTCAGT ACAAGAGCTT
GGTGGTAATG TTGAATCAAT CAATTCTGTT CTTGGGGTAA TACAAGGCAT TTCAGAACAA
ACAAACTTAC TCGCTTTAAA TGCTGCGATT GAAGCGGCAC GTGCCGGTGA GCAAGGACGA
GGATTTGCTG TTGTTGCCGA TGAGGTTCGC ACCCTAGCGC AAAGATCTCA ACAAAGTACT
GTTGAAATTT CAGATATTTT AGATAGCCTG AAAAGCAGTT CTCAACGTAC TATTCAAGAT
ATGAGCGAAT CTGCAGAGAA AAGAGCCGCG GTGTCTGATG CAATGTCAGC TATTCGAGGC
CTTATTGATT CAACTTCAGA GTCAATAAAG GAGCTAACAG AAATGAATAT ACACGTTTCC
ACCGCTGCTT CTGAGCAATC AGATGTTGCT AGCCAAGTAG CTGAAAGCAT CACTGGCATT
GCTAGTCTTG CAAAAGATAT AGGTGAAGGT TCTTCAGTTT CTAGAGAGAA ATTTGAAGAG
CTTGAATATC TATCTCAAGA GCTTAATCAG GTTTCTGATA AATTCGTAGT TTAG
|
|---|
| Protein sequence | MFKSLRVQIY ALAFLPFLFV AMLGLYLQFS SLKSFGDDVT TLTEKTILTI EKDRLKAIID
SVESLIQPYV NQSGTEGYDD ALKMLSHLTF DQGSGYIFAY KNDGERVLMG NKTAGIGKNY
WDLQDKQGQY IIRDLVNKSR QGGSFYTYWF PKLNETEASP KYSYAIYIDK WDLMIGTGFY
IDSMDTVIAS IDETISSSQS SNITKSLVTT LIIALIVGFI VTFAIKLIYS ALKNLSSSVE
ALAKGEGNLT QTIVDSPIDV LSDIANNFNR FLKALGGDIR NIKQTSVNLA EMAVQSTERQ
RRLEDSSDQQ MQETTQVASA VEEMASTSAE IANSAEVTRT SAEKAEIEMQ NVLTQVHSSN
QRMNELNLLL ENVEHSVQEL GGNVESINSV LGVIQGISEQ TNLLALNAAI EAARAGEQGR
GFAVVADEVR TLAQRSQQST VEISDILDSL KSSSQRTIQD MSESAEKRAA VSDAMSAIRG
LIDSTSESIK ELTEMNIHVS TAASEQSDVA SQVAESITGI ASLAKDIGEG SSVSREKFEE
LEYLSQELNQ VSDKFVV
|
|---|
| |