Gene CPS_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1265 
Symbol 
ID3519466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1298064 
End bp1298612 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content38% 
IMG OID637283729 
ProductC4-dicarboxylate transporter family protein, DctQ subunit 
Protein accessionYP_268008 
Protein GI71279030 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATT CATTTTCTAA GCCTACCAAC TCAGTAGCAC GATCAATGTT AAAAACAGCC 
GACATTTTTG AAGCCATTAT TCTTAAAGTA TCTGCCGTTT GTTGTTGGTC TTCAGCGTTA
TTAATTGCCG TCATTATCCT AAATGTAACC ATGCGGTACG GCTTCAACAA TGGACTGATT
TTATTTGAAG AGATTCAATG GCATCTATAC GCAATAGGTA TCATGTTCGG TTTATCGTAC
GCCGAAATAA CTAACTCACA AGTAAGAGTC GACGTTGTTG CCTCAATGCT GAAACCTAAA
ACGGTGCTGA AATGGGAAAT ATTCGGTGCT GTCTTTTTTA TCTTTCCAAC CATTTTTGTC
ATTTTGTTTA ATAGTTTCGA TTATGTCGCC AATTCATACA TGCTGGGCGA AAGTTCATCT
TCACCATTAG GTATGCCATT TCGATGGGCA ATTAAAGCTG CGATCCCTGC AAGTTTTATC
TTATTAGCTA TGGCTGTGCT CGCACGTATG TTTCGAAATA TTATTACCAT AACTCAAAAG
GAGACGTGA
 
Protein sequence
MTDSFSKPTN SVARSMLKTA DIFEAIILKV SAVCCWSSAL LIAVIILNVT MRYGFNNGLI 
LFEEIQWHLY AIGIMFGLSY AEITNSQVRV DVVASMLKPK TVLKWEIFGA VFFIFPTIFV
ILFNSFDYVA NSYMLGESSS SPLGMPFRWA IKAAIPASFI LLAMAVLARM FRNIITITQK
ET