Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1265 |
Symbol | |
ID | 3519466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1298064 |
End bp | 1298612 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637283729 |
Product | C4-dicarboxylate transporter family protein, DctQ subunit |
Protein accession | YP_268008 |
Protein GI | 71279030 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATT CATTTTCTAA GCCTACCAAC TCAGTAGCAC GATCAATGTT AAAAACAGCC GACATTTTTG AAGCCATTAT TCTTAAAGTA TCTGCCGTTT GTTGTTGGTC TTCAGCGTTA TTAATTGCCG TCATTATCCT AAATGTAACC ATGCGGTACG GCTTCAACAA TGGACTGATT TTATTTGAAG AGATTCAATG GCATCTATAC GCAATAGGTA TCATGTTCGG TTTATCGTAC GCCGAAATAA CTAACTCACA AGTAAGAGTC GACGTTGTTG CCTCAATGCT GAAACCTAAA ACGGTGCTGA AATGGGAAAT ATTCGGTGCT GTCTTTTTTA TCTTTCCAAC CATTTTTGTC ATTTTGTTTA ATAGTTTCGA TTATGTCGCC AATTCATACA TGCTGGGCGA AAGTTCATCT TCACCATTAG GTATGCCATT TCGATGGGCA ATTAAAGCTG CGATCCCTGC AAGTTTTATC TTATTAGCTA TGGCTGTGCT CGCACGTATG TTTCGAAATA TTATTACCAT AACTCAAAAG GAGACGTGA
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Protein sequence | MTDSFSKPTN SVARSMLKTA DIFEAIILKV SAVCCWSSAL LIAVIILNVT MRYGFNNGLI LFEEIQWHLY AIGIMFGLSY AEITNSQVRV DVVASMLKPK TVLKWEIFGA VFFIFPTIFV ILFNSFDYVA NSYMLGESSS SPLGMPFRWA IKAAIPASFI LLAMAVLARM FRNIITITQK ET
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