| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1248 |
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| Symbol | |
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| ID | 3520997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1279205 |
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| End bp | 1280353 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637283712 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_267991 |
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| Protein GI | 71280531 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT CTTTATTGAG AATTCAAGCA ATCGTCACTA AAGAGTTATT GCAACTTAGC
CGCGATAGAA TGACCTTTGC CATGGTGATC ATGATCCCCC TAGTTCAACT ATTGTTATTT
GCTTTTGCTA TTAACACCAA TGTACGGAAT ATTCCCGTTG GCGTAGTTGA CCATAGCCAA
ACATCGCTAA GTCGCATATT ACAACAAACA GTTTCTGCAA CAGGTATCAT AACCTTCACC
CACAGCTATC ACTCGGTAAA AGCGGCACAA AAAGCGATTG ATAGTAACGA AGTGCGCGCG
GTACTGATTA TCCCACAAGA CGTTAGCCAG CGATTGGTTC GTCATCCCAG TGTCGGCTTT
GGTTTACCGC CATCAAGTAA ACAAGAAACC AGCAGGCCAA TTGCACAATG GTTAGTCGAT
GGCTCAGACA CCGTTATAGC GGGTAGTATA AAGAGTTTGC GCAATATGCC ACTAGTTGAA
CTTCTAGATA AACCGGCCAA CCGAAATACC CCGACGTTTG AAGTGACCTT ACTCTATAAT
CCAGAACAAC GTAGTGTAGT GAACATTGTA CCTGGCCTTG TTGCCGTAAT ACTGACAATG
ACGATGATAA TGTTTACTTC GGCAGCTATT GTCAGAGAGC AAGAGCGCGG GAATATGGAG
ATGCTCATTA CTACACCACT TGCCCCCATC GAATTGATGA TTGGTAAAAT ATTTCCGTAT
ATTTTCATTG GCGCGATTCA AGTCAGCATT ATTTTAGGAC TCGGTTATTG GCTTTTTAAC
GTGCCTTTCA ATGGTGGATT GGCCCAACTT GCTATTGCTA CCTTGCTGTT TATTTGCGCC
AGTTTAGTAC TTGGATTAGT CATATCAACC ATAGCTAAAA ATCAATTACA GTCAATGCAA
ATGACCATTT TCATTTTGCT CCCCTCAATA TTATTATCTG GTTTTATGTT TCCTTATGAA
GGTATGCCAC TGCCTGCGCA ATACATTGCA GAGGCGTTAC CCGCTACGCA TTTTATTCGC
TTAATTAGGG GCGTTGTATT ACGTGATGTG GATGTTATTG AGATGAACTT TGATATGTTT
TGGTTAATTG GTTTTACCTG TTTTGGCTTG CTCGTTGCCG CATTGCGTTT TAAGAAGACA
CTTGATTAA
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| Protein sequence | MKTSLLRIQA IVTKELLQLS RDRMTFAMVI MIPLVQLLLF AFAINTNVRN IPVGVVDHSQ
TSLSRILQQT VSATGIITFT HSYHSVKAAQ KAIDSNEVRA VLIIPQDVSQ RLVRHPSVGF
GLPPSSKQET SRPIAQWLVD GSDTVIAGSI KSLRNMPLVE LLDKPANRNT PTFEVTLLYN
PEQRSVVNIV PGLVAVILTM TMIMFTSAAI VREQERGNME MLITTPLAPI ELMIGKIFPY
IFIGAIQVSI ILGLGYWLFN VPFNGGLAQL AIATLLFICA SLVLGLVIST IAKNQLQSMQ
MTIFILLPSI LLSGFMFPYE GMPLPAQYIA EALPATHFIR LIRGVVLRDV DVIEMNFDMF
WLIGFTCFGL LVAALRFKKT LD
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