| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1206 |
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| Symbol | |
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| ID | 3518427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1239412 |
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| End bp | 1240434 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637283670 |
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| Product | putative outer membrane porin |
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| Protein accession | YP_267949 |
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| Protein GI | 71278969 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGG TTAAAAGCTG TATTGCAATA ACTCTTTGTT CTTTATTATC AATGCCAACA
TTTGCGGCCG ATAAAGCATC TGAGAAGACA CAGAAACAAG AAGAAGTTAT TAATTTTTAT
GGCAAATTAA ATATTTCATT ACAGGCAAGC GAAGAAAAAG GTGAGTCTTT TAATGAGCTA
AAAAGTAATG CTTCTCGAGT AGGGGTAAAG GGTAAATATG AATTAGACCA TGATCTAACG
GCTATTTATA AACTTGAATG GCAGGTTAAT GTTAATGATG ATAGTAAAGA TACACTAACT
GCGCGTAATC AGTGGGTTGG TGTCAGAGGT GGATTTGGTG AGCTTACGGT AGGTCGTTCA
GATACAACCT TAAAAGTTTC ACAAGGAAAA TTTGACTTAT TCAATGATTA TGAAGCTGAT
TTAAAGCACT TATTTATCGG TGAAAACCGT GTAGCTGATT CAATTACCTA TAAATCACCT
GTTTTTAGTA ATGTTCAACT ATTAACCAGT TATATAATTT CCGATGATAT CGAAGCCGAT
GACCCATACT CTGTTGGGAT ATTTTTTGGT GATTTGAGCT TGAAAAAAAC TGATTTTTTC
TTATCCGTTG CTCATGATGA AAATATGCCA GTTAAATTTA AACCGGTAGA TTCAGGTGAG
AGTTCAAGAA CTGAAGCATT AGCAAATACG CGTGTAACGG GTATGTATAA ATTTGGTGAT
TTACGTTTAG GGGCGATGTT TGTAGATACT GAAGTTGTCA ATACAGGTAA GTCTGAAACA
GGCTATGCGG CCAATGTTTC TTATAAGATA GGCAAGGTGC TTGCGAAGGT TCAATATCAA
GAGTTTTCAG GCGCTGATTC GATAAGTGTT GGTGCAGATT ATAAACTAGG TAAAAATACT
AAAGTATATG CTTGGTTTAC AGATAGAGAA GGCAATGAAG TGACTGCTGG TGATGATGGC
GTTGATTACA TTCTTGCCAC AAAAGGACAG TATTTTGCCC TTGGTATGGA ACAAAAATTC
TAA
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| Protein sequence | MKLVKSCIAI TLCSLLSMPT FAADKASEKT QKQEEVINFY GKLNISLQAS EEKGESFNEL
KSNASRVGVK GKYELDHDLT AIYKLEWQVN VNDDSKDTLT ARNQWVGVRG GFGELTVGRS
DTTLKVSQGK FDLFNDYEAD LKHLFIGENR VADSITYKSP VFSNVQLLTS YIISDDIEAD
DPYSVGIFFG DLSLKKTDFF LSVAHDENMP VKFKPVDSGE SSRTEALANT RVTGMYKFGD
LRLGAMFVDT EVVNTGKSET GYAANVSYKI GKVLAKVQYQ EFSGADSISV GADYKLGKNT
KVYAWFTDRE GNEVTAGDDG VDYILATKGQ YFALGMEQKF
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