| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1194 |
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| Symbol | |
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| ID | 3519831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1221977 |
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| End bp | 1223320 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283658 |
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| Product | putative proton/glutamate symporter |
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| Protein accession | YP_267937 |
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| Protein GI | 71279376 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.17283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCCAC CCTCCAAAAA AAATAGCTTA ACCAGCCGCA TTGTTATCGG TATGGTTGCA
GGTATTTTAT TAGGAACTTT CTTGCAGTGG CTTATGCCCA ATGGCTCTGA CAAAGTTATT
AACCTTTATT TATTTGAACT TTCTCTAAAA GGCTTATTTG TAGATGGCAT ATTAGAAGTG
ATTGGCCAAG TTTTTATGGC CAGTTTACGT ATGTTAGTTG TTCCCTTAGT TTTTGTATCG
TTAGTCTGTG GGGTATGCTC CTTAAAAGAT ACCAGTAAGC TTGGCCGCAT AGGTGGCAAA
GCGGTAGCCT TATATCTCGC CACTACAGCT ATTGCTATAA GCTTTGCTAT TTTTGTTGCG
CTAATTATTG CTCCGGGCGA AGGCGTTAAT ATGGTAGCTA ACAGTAGCTT TTCAGGTAGA
GAAGCTCCTT CTTTAGCACA AGTTATTATC CAAATGTTTC CTACCAATCC TTTCGCATCC
TTTGCACAAG GTAATATGCT GCAAGTAATC GTTTTTGCAT TACTTTTTGG TATTGCTATC
GCTCTTTCAG GTAAAGCTGG TGAACGTGTC GCTTTATTAT TTGAAGATTT AAGTGAAGTG
ATCATGCGTC TGGTCACAAT TTTAATGAAT ATCGCTCCTT ATGGTGTATT TGCACTATTG
GCAACCTTGT TTACGACTGT GTCATTAACG ACTTTTGGTA ATTTAATTGA ATATTTCTTA
GTAGTATTTT TTGTTCTAGT TATTCATGCT TTAGTTACTT ACCCTATTAT TTTAAAATTA
TTTACGGGTT TAAATCCGGT AATCTTTTTA AAGAAAATGC GTGACGCTGC TATTTTTGCT
TTCTCTACCG CCAGTTCAAA TGCCACTATC CCTGTTACTT TAGAAACAGC AACAAAAAAG
ATGGGTGTAA AAAACTCCAT CGCATCATTT ACCGTGCCGC TTGGTGCCAC CATTAATATG
GACGGCACCG CAATCATGCA AGGTGTGGCT ACTGTTTTTA TCGCGCAAGT TTTTACCCAG
GATTTAACCC TAGCCGACTA CTTAACCGTT GTGCTTACTG CAACCCTAGC TTCTATAGGC
ACAGCAGGTG TGCCAGGCGT TGGTTTAATC ATGCTAGCCA TGGTATTAGA GCAAGTAGGT
TTACCTGTTG AAGGCATTGC TCTTATTATT GGTGTCGATA GATTACTGGA TATGACACGT
ACTGCGGTCA ATGTTACTGG CGACAGTATG GTGAGTCTTG TGGTTGCTAA AAGTGAAGAC
CAGTTTGACC ATGAAATGTA TCTTGACCCA CAAGCAGGCC ATAACATTGA AGAAATCGAC
TTTAAGCACC TAAAAGACAA TTAA
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| Protein sequence | MSPPSKKNSL TSRIVIGMVA GILLGTFLQW LMPNGSDKVI NLYLFELSLK GLFVDGILEV
IGQVFMASLR MLVVPLVFVS LVCGVCSLKD TSKLGRIGGK AVALYLATTA IAISFAIFVA
LIIAPGEGVN MVANSSFSGR EAPSLAQVII QMFPTNPFAS FAQGNMLQVI VFALLFGIAI
ALSGKAGERV ALLFEDLSEV IMRLVTILMN IAPYGVFALL ATLFTTVSLT TFGNLIEYFL
VVFFVLVIHA LVTYPIILKL FTGLNPVIFL KKMRDAAIFA FSTASSNATI PVTLETATKK
MGVKNSIASF TVPLGATINM DGTAIMQGVA TVFIAQVFTQ DLTLADYLTV VLTATLASIG
TAGVPGVGLI MLAMVLEQVG LPVEGIALII GVDRLLDMTR TAVNVTGDSM VSLVVAKSED
QFDHEMYLDP QAGHNIEEID FKHLKDN
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