Gene CPS_1170 details

Gene Information

• Locus tag: CPS_1170
• Symbol: pepO
• ID: 3522373
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 1191506
• End bp: 1193569
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637283634
• Product: metalloendopeptidase PepO
• Protein accession: YP_267913
• Protein GI: 71281901
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG3590] Predicted metalloendopeptidase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCAA TTATTACTAG TGCAATTTGC TCATCATTAT TACTAATGAG CGGTTGTACT 
ACTCAAGCTG ATAGTAGCAA TAACGCACCA TTAGTGACTC AAAAAACGGC ACTGGCTTCA 
GGCATCGAAA AAGCTAATTT AGACACCAGC GTTCGTCCAC AAGATAATTT CTATCGTTAT 
GTAAATGGTA ACTGGCTAAA AAGCCACGAA ATTCCAGGTG ATAAAACGGC TATTGGTTCA 
TTCTATGATC TTCGCGATCA AGCCGATGAT GATGTTAAAG CAATCATAGA AGAGCTTGCT 
GCAGAAGATA ACTTAGCTAA AGGTAGCGAT GAACAAAAAG TAGCTGATAT TTTTCGCTCA 
TACATGAACA CGGAAAAACG TAATAATTTA GGTGTTAAAC CAATTCAACC TGTTTTTGAT 
GCTATTAACA ATATTAATGA CAAATCAGAA TTAGCGACTT TTTTTGGTAA ATATCAAGCC 
GTAGGTGTAG GCAGCCCTTT AGCTTTTTAC ATTAGTGTTG ATGCTAAAGA CTCTAGCAGC 
TATGCCACTC ACATCTGGCA AAGTGGCCTA GGTCTACCTG ATAAAGACTA CTATTTTAAT 
GAAACAGAAC GTTTTATCGC TTTACGTGCT GGTTATATTG CCCACATTGA AAACATGTTC 
AAACTAGCTG GTCTTGCTAA TGGTAAAGAA GCCGCTGAAA CTATCATGTC ACTAGAGACA 
AAGTTAGCTA AATTTCACTG GACCCAAGTT CAAAGTCGCG ACAGTGAAAA ACGCTACAAC 
AAGTTTGCTG TTAATAAGTT AAATGAATTA ACAGATGCTT TTGATTGGTC AGCTTATTTA 
GCTGCGCAAG GTGTTGCCTC TCAAAAAGAT ATTATTATCA ACCAACCAGA TTTTGTTGCT 
GGTTTCGGTG GCATATTTGC CGAAACTTCG TTAGAAGATT GGAAAACCTA TTTGAATTTC 
CACAGCTTAA GTAATTTCGC TAGTTACTTA AGTACTGATA TTGATAACGA AAACTTTGAT 
TTTTACTCTA AACAATTAAG TGGTAGACAA GAGCAACGAC CACAATGGAA ACGTGGCGTT 
AGTGTCGTTA ACTCAAATTT AGGTGAAGTC ATTGGCAAAG TATATGTTAC TCGCCACTTT 
ACTCCACAAG CTAAAGCACG CATGAGCGAG TTAGTTGAAA ATTTACGTAC CTCTTATGGC 
AATAGCATTG ATGATCTTGA ATGGATGTCA GCAGATACCA AAAAAGCAGC CCATGTTAAG 
TTAGCCGCTT TCACGCCTAA AATTGGTTAC CCTGATAGAT GGGAAGATTA CTCTGGACTT 
AGCATCGACG CTGACGATTT AGTGGGTAAT ATTCTACGTT CTTCACGCTT ATCTCATGAT 
AAAGAAGTTT CAAAACTTGG TGGTCCAATT CAAAAATGGG AATGGGGCAT GACACCGCAA 
ACAGTTAATG CTTACTACAA CCCAACGGTA AACGAAATCG TTTTCCCTGC AGCTATATTA 
CAAGCGCCAT TTTTTAATAT GAAAGCTGAT AGCGCTGTTA ACTACGGCGG CATCGGTGCA 
GTAATTGGGC ATGAGATGGG CCATGGTTTT GATGATCAAG GTAGTAAATA TGACGCCGAA 
GGCAACCTTA GAAATTGGTG GACTGAGCAA GATTTAGCTG AGTTTGCTAA CCGTACTAAA 
GCCTTAGTTG AACAGTATGA TGCATATCAC GTTTTTGACG ACTTAGCTGT AAATGGTAAA 
TTGACTTTAG GTGAAAACAT TGGCGATTTA TCGGGTGTAA CTATCGCGTA TAGAGCCTAT 
AAAGCATCAT TGAACGGTAA AGAAGCACCT ATCATTGATG GTTTAACCGG CGATCAACGT 
TTCTTTATGG GTTATGCTCA AATTTGGCGC GCAAAAATTG TAGAGAAGTC TGCACGTAAT 
CGTGTAGCGA CTGACCCACA TTCACCTGCT GAATTCCGTG CACTTGGCTC TCTTTCAAAC 
ATCAATGAAT TTTATGAAGC ATTTGATGTT AAAGAAGGGG ATGCTATGTA TATAGCACCA 
GAAAAACGCG TTAAAATTTG GTAA 

 

Protein sequence

MKAIITSAIC SSLLLMSGCT TQADSSNNAP LVTQKTALAS GIEKANLDTS VRPQDNFYRY 
VNGNWLKSHE IPGDKTAIGS FYDLRDQADD DVKAIIEELA AEDNLAKGSD EQKVADIFRS 
YMNTEKRNNL GVKPIQPVFD AINNINDKSE LATFFGKYQA VGVGSPLAFY ISVDAKDSSS 
YATHIWQSGL GLPDKDYYFN ETERFIALRA GYIAHIENMF KLAGLANGKE AAETIMSLET 
KLAKFHWTQV QSRDSEKRYN KFAVNKLNEL TDAFDWSAYL AAQGVASQKD IIINQPDFVA 
GFGGIFAETS LEDWKTYLNF HSLSNFASYL STDIDNENFD FYSKQLSGRQ EQRPQWKRGV 
SVVNSNLGEV IGKVYVTRHF TPQAKARMSE LVENLRTSYG NSIDDLEWMS ADTKKAAHVK 
LAAFTPKIGY PDRWEDYSGL SIDADDLVGN ILRSSRLSHD KEVSKLGGPI QKWEWGMTPQ 
TVNAYYNPTV NEIVFPAAIL QAPFFNMKAD SAVNYGGIGA VIGHEMGHGF DDQGSKYDAE 
GNLRNWWTEQ DLAEFANRTK ALVEQYDAYH VFDDLAVNGK LTLGENIGDL SGVTIAYRAY 
KASLNGKEAP IIDGLTGDQR FFMGYAQIWR AKIVEKSARN RVATDPHSPA EFRALGSLSN 
INEFYEAFDV KEGDAMYIAP EKRVKIW