Gene CPS_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1131 
Symbol 
ID3518830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1153622 
End bp1154128 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content40% 
IMG OID637283595 
ProductRrf2 family protein 
Protein accessionYP_267874 
Protein GI71278574 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02010] iron-sulfur cluster assembly transcription factor IscR
[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA CCTCTAAAGG TCGTTACGCA GTTACTGCCA TGTTAGACGT TACTATTCAT 
GCAGTGTCTG GACCTGTATC TTTGGCTGAT ATTTCAGAGC GCCAAGGTAT TTCCTTGTCA
TATTTAGAGC AACTTTTTTC ACGTTTACGT AAAGAAGGGC TTGTGACAAG TGTTCGTGGT
CCTGGTGGCG GTTATCGCTT GGGCAGATGC TCAGCGCAGA TTGCCGTTGC AGATGTTATT
TATGCTGTGA ATGAAAGTGT TGATGCAACT AAATGTTCAG GTAAAGGCAA TTGCCAGGAT
GGAGAACAAT GCTTAACTCA TTCCTTGTGG GAAGGATTAA GCCAACGAAT TGAAGAATTC
TTGAAAAATA TCACCTTATC CGAATTAGTC GCGAAAGGTG ATGTACAAGA AGTTTCTAAG
CGCCAAGATA AATTACATAT CAATGCTCAC AAAAGCATAG CGTTAGAAAC ATTAATAACC
ACAAAAGATG TAATGAACGA CTGGTAA
 
Protein sequence
MKLTSKGRYA VTAMLDVTIH AVSGPVSLAD ISERQGISLS YLEQLFSRLR KEGLVTSVRG 
PGGGYRLGRC SAQIAVADVI YAVNESVDAT KCSGKGNCQD GEQCLTHSLW EGLSQRIEEF
LKNITLSELV AKGDVQEVSK RQDKLHINAH KSIALETLIT TKDVMNDW