| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1107 |
|---|
| Symbol | serB |
|---|
| ID | 3519136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1130762 |
|---|
| End bp | 1131682 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637283571 |
|---|
| Product | phosphoserine phosphatase |
|---|
| Protein accession | YP_267851 |
|---|
| Protein GI | 71278256 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCTGAAA AAGCAGTTAC TTTAGCTGAT AATATATTAA GTGAACCGGC AACAGAAGAG
CAGATAGAGT TGGTTGTATT CCAACAACTT CCACTGTCGC AGCTGTTAGC ATTGCAAAAC
GATGCTCAGC TTGAAATCAT AACGCTCACT ACGATTAATC ACCGTAATAA TCAAACGAGT
TGTCGTTTTC AAGTGAACTG TGCTGACTTT ATCAAAACCC GTAAAGCAGT AGCTGACTTC
GCTTTAGCGA ATAAAATTGA AGCCGCTTTA TTAACACAGG TACCTAAATT AGCAGTGCCT
GGATTATTAG TGATGGATAT GGACTCAACC ACCATAGAAA TTGAGTGTAT TGATGAAATA
GCTAAGCTAG CGGGCGTTGG TGAAGAAGTC GCTGAAGTAA CAGAGCGCGC CATGTTGGGT
GAACTCGATT TTGCACAAAG TCTGCATCAA CGTGTAGCAA CATTAGCAGA GTCACCGGAA
AGTATATTAA GTGATGTAGC AAAAAACATT CCCTTAATGG CTGGATTAAA ACCACTCATT
GTTGAGCTTA AAAAGCACAA TTGGCGTATT GCTATTGCTT CTGGTGGTTT TACTTATTTT
GCCGATCATC TAAAAGAAAC CTTAAACTTA GATGCTGCTT TTGCCAACAC CCTTGAAATT
ATTGATGGAA AACTCACCGG TAAGGTTTTA GGTAGCGTGG TTGATGCGCA AGTAAAAGCG
GATTCTTTAG CCATTTTAAG TAAAGAGTAT CAAATACCAG TAAATCAAAC CGTTGCGATG
GGTGATGGTG CCAATGATTT AGTGATGATG GCTGCGGCAA GCTTTGGTGT TGCTTTCCAT
GCTAAACCTA TTGTATTAGC TCAAGCTGAT AGCAGCATAA ACGAGCAAGG TTTAGATTGC
CTGTTACACT GGTTAGCGTA G
|
|---|
| Protein sequence | MSEKAVTLAD NILSEPATEE QIELVVFQQL PLSQLLALQN DAQLEIITLT TINHRNNQTS
CRFQVNCADF IKTRKAVADF ALANKIEAAL LTQVPKLAVP GLLVMDMDST TIEIECIDEI
AKLAGVGEEV AEVTERAMLG ELDFAQSLHQ RVATLAESPE SILSDVAKNI PLMAGLKPLI
VELKKHNWRI AIASGGFTYF ADHLKETLNL DAAFANTLEI IDGKLTGKVL GSVVDAQVKA
DSLAILSKEY QIPVNQTVAM GDGANDLVMM AAASFGVAFH AKPIVLAQAD SSINEQGLDC
LLHWLA
|
|---|
| |