Gene CPS_1073 details

Gene Information

• Locus tag: CPS_1073
• Symbol: ispF
• ID: 3522077
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1093771
• End bp: 1094283
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637283537
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_267817
• Protein GI: 71281605
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATAG GTCATGGTTT TGATGTACAT AAATTTGGTG GCAAAGGGCC TTTAGTGCTC 
GGTGGAGTAA AAATACCTTT TGAACTGGGA TTTATCGCAC ACTCCGATGG CGACGTCGCG 
ATTCATGCGC TTTGTGACGC TATTTTAGGG GCATTATGTT TAGCTGATAT TGGCAACCAC 
TTTCCTGATA CCGACGGACA ATATGAAAAT ATCTCTAGCA GAATACTACT ACGTCATGTT 
GTTTCGTTAA TGACAGACAA GGGCTTTCAA CTAGGCAATG CTGATATTAC GATTGTAGCT 
CAAGCACCTA AGATGGCACC TCATTTAGTA GCGATGCGTA CTTGTTTAAG TGAAGACTTA 
AAAACAACAA TTGAGCAAGT TAATGTGAAA GCCACCACGA CAGAAAAACT AGGGTATACC 
GGGCGAAAAG AAGGTATCTC AGTGCATGCC GTGGTTTTAT TAATTGCAAT TGAACATCCT 
TTACCACTTA TCGAAGAAAT ACAAAATATT TAG 

 

Protein sequence

MRIGHGFDVH KFGGKGPLVL GGVKIPFELG FIAHSDGDVA IHALCDAILG ALCLADIGNH 
FPDTDGQYEN ISSRILLRHV VSLMTDKGFQ LGNADITIVA QAPKMAPHLV AMRTCLSEDL 
KTTIEQVNVK ATTTEKLGYT GRKEGISVHA VVLLIAIEHP LPLIEEIQNI