| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1072 |
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| Symbol | ispD |
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| ID | 3522280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1092969 |
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| End bp | 1093700 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283536 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_267816 |
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| Protein GI | 71281808 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGTCAA CTCTAAAGTT TATTGTTATT GTACCCGCTG CAGGCGTAGG TAAACGCATG
CAGGCAAATT GTCCCAAACA ATACCTTCGC ATCAATAATG AAACAATTTT ATCGCATACT
GTGATGAGGT TGTTAAGTCA CCCGTTAATC AGTCAAGTTA TTGTTGCTTT AGGAACCGAG
GATCAATACT TTGCGGAATC TGAACTAGCA CATCATAAAG ACATCATTCG TGTAAACGGA
GGTACTGAAC GAGTTAATTC AGTGCTCAAT GGTTTAAAGG CTGTCGATAG CGATAAATAC
CCTTGGGTAT TAGTACATGA TGCGGCGCGC CCCTGTGTTA GCCATCAAGA TATCGATAAG
TTAATTACTC GATGCTTACG CAAAGATTAC GGCGGAATAT TAGCCACGCC TGTTAGAGAC
ACCATGAAAC GTGGCGTACT TATTAAAGAC AGTGCTAAAG GTGATAATAC TATTATCGAG
AGCACCGTCG AGCGAGAGCA ATTATGGCAT GCTTTGACAC CACAGATGTA TAAGACTGAT
GAGTTAACAC TTGCCATAGA GCAAGCTCTA GAAAATAGTT TAAAAATAAC GGATGAAGCT
TCAGCTATTG AACAGGCTAA CTTACCTAGC TTATTAGTTT CAGCAAGTAG TGAAAATATA
AAGATAACTC ACCCTAATGA TTTAGCATTA GCTGAATTTT ATTTAAATAA GCAAGCGAAT
AATACCAATT AG
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| Protein sequence | MASTLKFIVI VPAAGVGKRM QANCPKQYLR INNETILSHT VMRLLSHPLI SQVIVALGTE
DQYFAESELA HHKDIIRVNG GTERVNSVLN GLKAVDSDKY PWVLVHDAAR PCVSHQDIDK
LITRCLRKDY GGILATPVRD TMKRGVLIKD SAKGDNTIIE STVEREQLWH ALTPQMYKTD
ELTLAIEQAL ENSLKITDEA SAIEQANLPS LLVSASSENI KITHPNDLAL AEFYLNKQAN
NTN
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