| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0980 |
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| Symbol | |
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| ID | 3523000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 986971 |
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| End bp | 989340 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637283445 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_267729 |
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| Protein GI | 71282525 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.966041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAACTT TAAACAACTA CCTAGCTATA GATGAAGATA AACAGTGGAT TTTATCGCAA
GATCAGTTAA CACACCTTTC AGAGGGTGTT ATTGAAACAT TATTTTCATT AGGTAATGGT
ACTTTAGGTA CGCGTGGCAC TAGCGGTTAT GAAAGTGACA TCACCCAACC TGAGTGTGAA
GGCACTTATA TCAATGGGTC TTATATCAGA GAGACGATTG AATATGATGA ATCAGCTTAT
GGCTTTGCAC AATTTAATAA TAAAATGATG CAAGCATTTA ATACCAAAGC TATTGAAATA
TCATCAGAAA ATGAAGTTTT CAAACCTCAT AGCATTGGCA AAAGACATGT AAACTTGCAC
CAAGCGTCTT ATCATGAGGT ATTACAACTT CACTCAGATT CAGGTAAAGA AATTAAGCTG
CATATCACTC GATTTGTATG TCAACATCAA CAAAATATGA TGATAAATCA CTACCAAATA
GAGGCGGTAA ATTTTTCAGG TAAATTACAA ATAACGTCTT CGATTAGAGG AAGTGATTCG
ACAAGTCAAA ATAGCAATGA CCCTAGAATA GGCAATTTAT CAATGATTGA TAAACTACAC
TGTTTAGAGT CATTATCTAC ACCCGAATAT GCCTTTCTAT TACATCAACT ATCAGATCCA
AAAAGTTTGA TGATTGCTGC AACAAGTCAC CAGTTTGAGC AAAAAAATAA GCATATTAAG
ATCAGTTCAA ACAGTAAAAA TGTATTAACT GAACAATTTG AAGTAGAACT TACTGACAAT
AAAGTTACCT TCAGTAAATA CAGCTTATAT TTATGCCCTC AAACGTTAAC AAGTAATAAT
CAACAACAAA ACGCACCAGT AGATGAGCAA GCATTAATCA CTCAAGCTCG TGAAGAGCTC
TTATGTGCTA AAAACCTTGG TTATCAAGAG AACTTACAAT TACATCAACA ATTGATGAAT
GATTTTTGGC AAGATAGTGA TGTAATCATT GAAGGGCATG ACCAACATCA ATTAGCTATC
AGATTGAATA TGCTGCATTT AACTATGTCA GCAGGAAAAG ATGGTCAAAG AAATATAGCC
GCCAAAGGTT TAACTGGCCC TGGTTACGAC GGGCATTACT TTTGGGACTC AGAGATCTAT
ATTATCCCCT ACTTCATTTA CACTCAGCCT GATGTAGCAA AAAGCCTATT AAGTTATCGC
TTTAACAGTT TAGCAAAAGC TAAGAGTCGT GCAACAGAAA TGGGCCATGA ACAAGGCGCC
TTATTTCCTT GGCGTACTAT CAGTGGTGAA GAATGTTCAT CCTTTTTTCC AGCAGGAACA
GCGCAATACC ATATCAATGC AGCAATTGCC TACGCAGTGA GACAATATTT TAAAGCAAGT
GATGACTGGC AGTTCATTTG GGATGAAGGT GCTGAACTTG TTATTGAAAC CGCACGATTA
TGGCCCTCAT TAGGGCATTT CAACAAAAAT AACAGTAATC GTTTTTGCAT TGATACTGTT
ACTGGACCAG ATGAATATAC CGCATTGGTT AATAACAATT ATTACACTAA CTCAATGGCA
AAAATTCACT TATCCTTTGC TATTGAGCTG ATAAATAAAT TAAGCGTTAA CAATGAAATC
CGATGTAACC TGCTGCTAAC TAAGCTAAAT CTTTCCATTG AAGAGCTGAA TATTTGGAAA
GAAATTGCTG AGAGAATGTA CCTTCCACAT CAAGCGGAGC AAAACATTAG CCCGCAGGAT
GACAGTTTTT TAGATAAAAA ACCTTGGGAC TTTATCGGTA CGCCCAAAGA TAAATACCCA
CTGTTATTAA ACTTTCATCC ACTGGTAATT TATCGTCACC AAGTTTTAAA ACAAGCTGAT
GTGATCCTTG CCAACTTTTT GCAAGATGAT GAAGTAGATA TCCGTTTAAA GCGAAATAAT
TTGGCTTTTT ACGAACCGAT AACAACTCAT GATTCAACCT TATCAGCCTG TACCCATAGC
TTAGCTTACA GTGAAACAGG CAATCATCAG GCCGCCTTTG ATTACTTTGA TGACACAGTG
TTAACGGATT TAAATAATCT ACACAACAAT AGCCATTATG GTGTGCATAC AGCCGCTATG
TCTGGTTCTT GGATGTGTAT TACACAGGGT TTTGCTGGCT TACGTATTAG AGATAATTAC
GCGAGTTTTC AGCCTAATTT ACCAAAGCAG TGGCAAGGTT TACGTTTTAA ATTGAAGCTA
TTGGGTTGCC AAGTTGAATT AACATTATCT CGTGGACAAA TAACTTACCA GCTATTGTCT
GGTAAACAGT TCTCTTTAAA ACATTACCAA CAAGATTATT TACTCACAGA ACTAGAGCCA
ACCTTGCATA TTGCAATTGA TGAAGATTAA
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| Protein sequence | MKTLNNYLAI DEDKQWILSQ DQLTHLSEGV IETLFSLGNG TLGTRGTSGY ESDITQPECE
GTYINGSYIR ETIEYDESAY GFAQFNNKMM QAFNTKAIEI SSENEVFKPH SIGKRHVNLH
QASYHEVLQL HSDSGKEIKL HITRFVCQHQ QNMMINHYQI EAVNFSGKLQ ITSSIRGSDS
TSQNSNDPRI GNLSMIDKLH CLESLSTPEY AFLLHQLSDP KSLMIAATSH QFEQKNKHIK
ISSNSKNVLT EQFEVELTDN KVTFSKYSLY LCPQTLTSNN QQQNAPVDEQ ALITQAREEL
LCAKNLGYQE NLQLHQQLMN DFWQDSDVII EGHDQHQLAI RLNMLHLTMS AGKDGQRNIA
AKGLTGPGYD GHYFWDSEIY IIPYFIYTQP DVAKSLLSYR FNSLAKAKSR ATEMGHEQGA
LFPWRTISGE ECSSFFPAGT AQYHINAAIA YAVRQYFKAS DDWQFIWDEG AELVIETARL
WPSLGHFNKN NSNRFCIDTV TGPDEYTALV NNNYYTNSMA KIHLSFAIEL INKLSVNNEI
RCNLLLTKLN LSIEELNIWK EIAERMYLPH QAEQNISPQD DSFLDKKPWD FIGTPKDKYP
LLLNFHPLVI YRHQVLKQAD VILANFLQDD EVDIRLKRNN LAFYEPITTH DSTLSACTHS
LAYSETGNHQ AAFDYFDDTV LTDLNNLHNN SHYGVHTAAM SGSWMCITQG FAGLRIRDNY
ASFQPNLPKQ WQGLRFKLKL LGCQVELTLS RGQITYQLLS GKQFSLKHYQ QDYLLTELEP
TLHIAIDED
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