| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0946 |
|---|
| Symbol | accC |
|---|
| ID | 3521765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 954102 |
|---|
| End bp | 955448 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637283411 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_267695 |
|---|
| Protein GI | 71281294 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.735057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATA AAGTTGTTAT CGCCAACCGT GGCGAAATTG CCTTAAGAAT ATTACGTGCT
TGTAAAGAGT TAGGTATTAA AACTGTAGCG GTTCACTCAA CTGCTGACAA AAATCTTAAA
CACGTATTAT TAGCTGATGA AACCATTTGT ATTGGTAAAG CACCAGCGCC AGATAGCTAC
CTTAATATTC CTGCAATCAT AACGGCAGCA GAATTAACTA ATGCTGTAGC GATTCATCCA
GGTTATGGAT TTTTAGCAGA AAATGCTGAT TTTGCTGAGC AAGTTGAAAA CTCTGGTTTT
GCCTTTATCG GTCCAAAAGC AGAAAGCATC CGTATTATGG GTGATAAAGT TCAAGCTATC
AAAGCAATGA AAGTTGCAGG TGTACCTTGC GTACCAGGTT CTGATGGCCC ATTGGATGAC
GATGAAGAAG CAAACAAAGC CCATGCTAAA CGTATTGGTT ACCCTATTAT CGTTAAAGCT
GCTGGTGGCG GTGGTGGTCG TGGCATGCGC GTTGTCCGTA GCGAAGCTGA ATTAGTTGAG
TCAATTGCTT TAACCAAAAA AGAAGCCGGC ACAATTTTCA AAAATGATAT GGTTTACATG
GAAAAATTCC TTGAAAATCC ACGTCATGTT GAAATTCAAA TAATGGCTGA CGGCAAAGGC
GCTGCAATTC ACTTAGGTGA ACGTGATTGT TCAATGCAAC GTCGTCATCA AAAAGTAGTA
GAAGAAGCTC CTGCACCTGG TATTACGCCT GAAATGCGCG CTAAAATTGG TGAGCGTTGT
TGTAAAGCTT GTGTTGACAT TAACTATCGC GGTGCTGGTA CCTTTGAATT TTTGTATGAA
AATGGTGAAT TCTATTTCAT TGAAATGAAT ACACGTATTC AGGTTGAACA TCCAGTAACT
GAAATGATCA CTGGTGTTGA TTTGATCAAA GAACAACTTC GTGTTGCTGC TGGTCAACCG
TTATCTTATA CCCAAGATGA CATCAAGGTT TCAGGTCACT CTATTGAATG TCGTATTAAT
GCGGAAGATC CTCGTACCTT TATCCCTTCA CCGGGTAAAA TTACGCGTTT CCACCCACCA
GGTGGTTTAG GCGTACGTTG GGATTCTCAT ATTTATGCTG ATTACTCTGT ACCTCCACAT
TATGACTCTA TGATTGGTAA ATTAATTACT TGGGGTGATA ACCGTGATGT AGCGATTGCA
CGTATGCGTA ATGCTTTATC AGAGTTAGTG ATTGATGGCA TCAAAACTAA CATTACTTTG
CATCAAGACA TTTTAAATGA TCAAGGTTTT GTTAATGGCG GCGCTAACAT TCATTATTTA
GAGCAAAAGT TAGCTGAACT TGGCTAG
|
|---|
| Protein sequence | MLDKVVIANR GEIALRILRA CKELGIKTVA VHSTADKNLK HVLLADETIC IGKAPAPDSY
LNIPAIITAA ELTNAVAIHP GYGFLAENAD FAEQVENSGF AFIGPKAESI RIMGDKVQAI
KAMKVAGVPC VPGSDGPLDD DEEANKAHAK RIGYPIIVKA AGGGGGRGMR VVRSEAELVE
SIALTKKEAG TIFKNDMVYM EKFLENPRHV EIQIMADGKG AAIHLGERDC SMQRRHQKVV
EEAPAPGITP EMRAKIGERC CKACVDINYR GAGTFEFLYE NGEFYFIEMN TRIQVEHPVT
EMITGVDLIK EQLRVAAGQP LSYTQDDIKV SGHSIECRIN AEDPRTFIPS PGKITRFHPP
GGLGVRWDSH IYADYSVPPH YDSMIGKLIT WGDNRDVAIA RMRNALSELV IDGIKTNITL
HQDILNDQGF VNGGANIHYL EQKLAELG
|
|---|
| |