| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0939 |
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| Symbol | |
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| ID | 3520033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 945172 |
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| End bp | 948678 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283404 |
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| Product | sensory box sensor histidine kinase/response regulator |
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| Protein accession | YP_267688 |
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| Protein GI | 71279574 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAGTTT GGCTTTCACT CGATACTTGG CTTATCACGA TACTGTCCAT TGCTTATTTG
GCAGTACTTT TTATTGTTGC CCATTGGGGA CAAAATCAAG CATCTGAAAA TTGGAGCTGT
AAACCTTGGG TTTATAGTTT ATCGCTGGGC GTTAGCTGTA GCTCATGGGC ATTTTATGGC
ACCGTTGGAC AAGCAGCGAC CACAGGGGCA TGGCTCGCAC CAATTTATAT CGGCTCTATT
CTTTGTTTAG TGCTGGCTTG GCCAATGCTA CACAAAATTC TCCTGATCGT TAAGCAGCAA
AATTTAACTT CCATTGCTGA TTTTATTGCC TTTCGCTACG ACCGTTCACC TAAAGTTGCT
GCGCTGGTTA CCCTTGTTGC ACTAACGGGT ATTATCCCCT ATATCGCGCT ACAACTTCGC
GCCATCAGTA CCAGTTTTGA TCTATTAACC GGTACTTATC AGTCGGGTAT CAGCACTGCT
TTTGTGGTGA CTATCGTACT TATCTTTTTC AGTATTTTAT TTGGTACGCG CCAAATAGCC
GCCAATAAAC AAAATCAAGG GTTAGTACTG GCCATCGCTT TTAGCTCTGT TATTAAATTG
TTTGCCTTAA CAGCAGTAGG TATTTTTGCC ACCTTCTATG TTTTTGATGG TTTTACCGAC
TTAATCAACC AAGGTGAAAA TATCAGCTCA ATTACTGGCA CTAATTCTGT TTATCTTGCA
GTAGCACAAG CAGTATTAGG GGCGATTACT ATATTTATCT TACCTCAGCA GTTTCATATG
ATGATGATTG AAAATCACCA TCAACAAGAG TTAAAAACTG CCCGTTGGCT GTTTCCTTTA
TACCTATTAC TTATTAATGT TTTTATTTTA CCTATCGCAA TTGCTGGGCA GTTAACCTTC
CCCGGCGGCA GTGTCGATGC CGATACTTAT GTGTTAACTC TCCCACTTTT TTACCAACAA
GCTTGGCTTG GCATTACGGT TTATATTGGT GGCTTAGCTG CAGCAACCAG CATGGTAATC
GTCGCCGCTA TTGTATTGAG TACCATGGTA TCAACCGAAG TATTAACGCC ACTGGTATTA
AAGTTTCGAT TGTTTAATAC CAAACAAAAA CAACAAATGT CTGGGCTATT GCTTAACCTG
CGTCGTGGTT CTATCGCCAT AATTCTTCTT CTTGCCTTCA TTTTCGAGCG TATCATTGCT
CAGCAAAATC ACCTTGCCAC CATCGGCTTA TTATCATTTG TTTTACTCTC ACAATTTGCC
CCAGCGACCA TTGGTGCTTT GTACTGGCGT AAAGCCAATG CAAAGGCAGC ATTAACGGGC
TTGGTTGTCG GCAGTATCGT CTGGCTCTAT ACCCTGTTAT TACCAGCATT AATCCCCAAC
AGCCAGTGGA TTGAAACAGG CTTATGGCAA ATGACTTGGT TAAAACCTAC TGCCCTCTTT
GGCGTTGATT TTTTAGATAG TACTAGCCAT GGTGTTTTTT ACAGTTTGCT GCTCAACGTT
ATCTGTTACG TTGTTGTCTC ATTAATCAGC CAACGCAGTG TCGGTGAAAA ATTACAAGCC
GAATATTTTG TCAATAAAAG CCAAAATCAG TTTGAACGGA ATTTATCCCT CGATGATTTA
TACAGTTTAT TAGTACGCTT TATTGATAAA CCGGCTGCTG AAGCGTTAAT GACCTTTGCT
AAAAGCAGTG AAAAAAACGA AAGTAACATT GAATACACTC GTCTACAGCT TTCGGGTGTA
CTAGGCTCAG CTTCAACACG CATGGTAATG AAAGCAGCCT CAACATCTCA GGATATGCCG
CTAGAAGATG TTGTAAGTAT TGTCGATGAA GCCAACCAAA TGTTTCGCTT TAACCGCGAG
TTATTACAAT CAGGGGTAGA GAATATTGAA CAAGGTATTA GTGTCATTGA CGCCGATATG
CGCTTAGTTG CTTGGAATCA ACGCTATATT CAATTGCTTG ATTATCCTGA AGGGTTTGTC
TGTGCAGGAA AGCCTATTGA AGAGTTATTA CGCTATAACA TTGCCAAAGG CATAATTACA
GGTACAGGTA CTGGAGAAAG CGCTAGTAGG CACGACGAAG GTGAAGATTT AATTACCCGA
CGTATTGAGC ATATGCGTAT GGGGCATAAC CATTACTTTC AGCGTTCTAT GCCCAATGGC
GTGGTATTAG AAATTAGGGG GCAATCAATG CCTGGTGGCG GTTTTGTTAG CACCTTTTCT
GATATTACCG CCCATATTGA AGCAGAAAAA GCCTTACAAA AAGCTAACGA AAGTTTAGAA
AGGCGTGTTG AAGAAAGAAC GCAAGAGCTG AGACGTGCTA AAGCAGAAGC TGAAGCAGCC
AACAGCAGTA AAACACGTTT TTTAGCTGCC GCCAGCCATG ACTTAATGCA GCCCTTTAAT
GCGTTGTCAC TATTTACTTC GATGCTGAAA AAGAAAGTCG AAAATGACGA ATTAGCACAA
CTGGCTAATA ATATTGACGA TTCATTGAAT GTTGTTGAAG CGCTACTTTC CGATTTAGTC
GAAATCTCAC GTCTTGATAA TAACTTAGAC ATTATTGAGA AGAACCACTT TGCGTTAGAT
GAGTTATTAA TACCGTTAAA GAATGAGTTT ACCGTTTTAG CCCAACAAGA TGACATTAGC
TTTAGTTATC AACCTAGTTC AACATGGGTA AATTCCGATA AGCGTATGTT ACGTAGAATA
CTACAAAATT TTTTATCAAA CGCTGTACAT TATTGCCGTG ATAAAACCGG TGACAAAGCC
GGTATTACCA ACAAAATAGT TTTAGGTGTT CGCCACAAAA AAGACGTTGT CCGTATTGAA
GTTTGGGATA ACGGCCCGGG GATAGCGGTC GATAAACAAC TGACTATTTT TCAAGAGTTT
GAGCGATTAG ACCAAAATCG TGAGATACCA GGTCTAGGAT TAGGCTTAGC TATTGCCGAA
CGTATGGCTT CGTTACTCGA TTTGAAAATA TCACTTAAAT CGACCGTAGG AAAAGGCACA
TGCTTTATGC TTGAGCTACC GAGAGTTGAG CATAAAGCCG TCAATCTACC AGGTAACTTA
TCTAACAAAA TACCGAATAA AACAGCAAGC CATGACATTA AAAATACCGT TACTATCAAT
GAAGACTTTG CTGATATGTC AGTATTAGTT ATTGATAATG ATGCGTTGAT GTTAACCGCT
ATATCTTCAC AATTGATTGA ATGGGGCTGT TTGGTTTATA CCGCGAAAGA TAAAGAATCG
CTAACTAAGA TTGTGACTGA AATGCAACAA CCCGCTCGCT TCATCATTGC TGATTACCAT
CTCGATAATA ATACCAATGG CGTTGATTTG GTAAGCCATT TATTACGTAA AGAGCATTGG
CAAAGCCCTT GTGTGATCTG CTCTGCCGAT CCTTCTGAAC AAGTTAGGCA ACACACCAGC
GATGCAAATT TTCTATTTTT ACGAAAACCC GTTAAATCAT TAGCGTTAAA ACGTTTGATC
AGACAGATAA CGTCGACCGT GTTATAA
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| Protein sequence | MLVWLSLDTW LITILSIAYL AVLFIVAHWG QNQASENWSC KPWVYSLSLG VSCSSWAFYG
TVGQAATTGA WLAPIYIGSI LCLVLAWPML HKILLIVKQQ NLTSIADFIA FRYDRSPKVA
ALVTLVALTG IIPYIALQLR AISTSFDLLT GTYQSGISTA FVVTIVLIFF SILFGTRQIA
ANKQNQGLVL AIAFSSVIKL FALTAVGIFA TFYVFDGFTD LINQGENISS ITGTNSVYLA
VAQAVLGAIT IFILPQQFHM MMIENHHQQE LKTARWLFPL YLLLINVFIL PIAIAGQLTF
PGGSVDADTY VLTLPLFYQQ AWLGITVYIG GLAAATSMVI VAAIVLSTMV STEVLTPLVL
KFRLFNTKQK QQMSGLLLNL RRGSIAIILL LAFIFERIIA QQNHLATIGL LSFVLLSQFA
PATIGALYWR KANAKAALTG LVVGSIVWLY TLLLPALIPN SQWIETGLWQ MTWLKPTALF
GVDFLDSTSH GVFYSLLLNV ICYVVVSLIS QRSVGEKLQA EYFVNKSQNQ FERNLSLDDL
YSLLVRFIDK PAAEALMTFA KSSEKNESNI EYTRLQLSGV LGSASTRMVM KAASTSQDMP
LEDVVSIVDE ANQMFRFNRE LLQSGVENIE QGISVIDADM RLVAWNQRYI QLLDYPEGFV
CAGKPIEELL RYNIAKGIIT GTGTGESASR HDEGEDLITR RIEHMRMGHN HYFQRSMPNG
VVLEIRGQSM PGGGFVSTFS DITAHIEAEK ALQKANESLE RRVEERTQEL RRAKAEAEAA
NSSKTRFLAA ASHDLMQPFN ALSLFTSMLK KKVENDELAQ LANNIDDSLN VVEALLSDLV
EISRLDNNLD IIEKNHFALD ELLIPLKNEF TVLAQQDDIS FSYQPSSTWV NSDKRMLRRI
LQNFLSNAVH YCRDKTGDKA GITNKIVLGV RHKKDVVRIE VWDNGPGIAV DKQLTIFQEF
ERLDQNREIP GLGLGLAIAE RMASLLDLKI SLKSTVGKGT CFMLELPRVE HKAVNLPGNL
SNKIPNKTAS HDIKNTVTIN EDFADMSVLV IDNDALMLTA ISSQLIEWGC LVYTAKDKES
LTKIVTEMQQ PARFIIADYH LDNNTNGVDL VSHLLRKEHW QSPCVICSAD PSEQVRQHTS
DANFLFLRKP VKSLALKRLI RQITSTVL
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