Gene CPS_0873 details

Gene Information

• Locus tag: CPS_0873
• Symbol: rplC
• ID: 3518812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 882877
• End bp: 883515
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637283338
• Product: ribosomal protein L3
• Protein accession: YP_267622
• Protein GI: 71278595
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.339067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATAG GTCTAGTTGG ACGTAAAGTG GGTATGACTC GTGTCTTCAC AGAAGATGGT 
GTTTCTACCC CTGTTACTGT TATCGAAGTT GAAGCAAACC GTGTTGCTCA GGTTAAAACT 
GTAGACAACG ATGGTTATTC AGCACTACAA GTTACTACGG GCAAGCGTAA AGCAAGCCGT 
GTAACTAAAC CTGCTGCTGG ACATTTCGCT AAAGCAGGAA TTGAAGCAGG CCGCGGCTTG 
TGGGAATTCC GTTTAAACGA AAATGAAGGT AGTGACATCG AAGCTGGCAG TGAAATCACT 
GTTGAAGTAT TCAATGACAC TAAATTAGTA GACGTTACTG GTACATCGAA AGGTAAAGGT 
TTCCAAGGCG GTATTAAACG CTGGAACTTT ACTATGCAAC ATGCAACGCA TGGTGTTTCG 
TTATCACATA GATCTAACGG TTCGTTAGGT CAATGTCAAA CACCAGGTCG TGTATTTAAA 
GGCAAAAAAA TGTCTGGTCA TATGGGTGCT GTGCGTTGTA CTACACAAAA CCTTGAATTG 
GTTCGCGTTG ATGCTGAACG TAACTTGTTG CTTATTAAAG GCGCAGTTCC GGGTGCTATC 
AATGGCAATG TAATCATCAA ACCAGCTGTT AAAGCTTAG 

 

Protein sequence

MTIGLVGRKV GMTRVFTEDG VSTPVTVIEV EANRVAQVKT VDNDGYSALQ VTTGKRKASR 
VTKPAAGHFA KAGIEAGRGL WEFRLNENEG SDIEAGSEIT VEVFNDTKLV DVTGTSKGKG 
FQGGIKRWNF TMQHATHGVS LSHRSNGSLG QCQTPGRVFK GKKMSGHMGA VRCTTQNLEL 
VRVDAERNLL LIKGAVPGAI NGNVIIKPAV KA