Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0863 |
Symbol | pip1 |
ID | 3519184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 877425 |
End bp | 878381 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283328 |
Product | proline iminopeptidase |
Protein accession | YP_267612 |
Protein GI | 71278187 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTACATT CACTTTATCC AGAAATTGAA CCATTTTCTC AACAGTATCT TAAAGTTAGT CCTCTTCACC AACTCTATAT TGAACAGTGC GGTAATGAAC AAGGAATACC TGTTATTTTT TTACATGGTG GGCCCGGTTC AGCTTGTCGA GAACAACATC GTTGTTATTT TGATCCTGCT ATTTACCATA TTATTTTATT TGATCAACGA GGCTGCGGTC GCTCAAAACC ACAAGGTGAG CTAAAGGAAA ACAACACCCT AGCATTAGTG GAAGATATCA ATACTATTCG TAAACATCTT GGCATTAGTC AATGGTTAGT CTTCGGTGGC TCTTGGGGGG CCACTTTAGC TTTGGTTTAT GCAAAACAGT ATCCTAAACA AGTGTTGGGC ATGATTTTAC GAGGCGTTTT TCTAGGTCGT GCACAAGATA TTAACTGGGT ATACACTAAT AAAGGTGCTG CTCAAATATA TCCCGACGCA TGGCAAGCAT TAGTTGATAA TCTCCCCATC GAGCAGCAAC AAGCACCACT AAATGCTTTA TATCAAAGGT TAATTAATAG CGATGAACAG ATAAGTCGAG ATGCCTATAA TCGTTTACAG CAATGGGAAT CGGCAATATT AAATATTCAA CCAGGCACCC CTGCTAGCAT AGTCGATACA ATCAATAAAA AACCCTCAAT CATTCAACTT CATTACTCAA TAAACCGTTG TTTCATTGAG AAAAATCCTA TTCTTGAGCA AATAACTCAA ATCAGTGATA TTCCAATTAA AATAATACAA GGCCGCTATG ATTTTGTTTG TCCGGTAGAG CAAGCATGGC AATTGGCATA CCATTGCCCA CAGGCAAAAT TAACAGTGAT TGATATGGCT GGTCACCTCG CGAACGAACC TTTAATGAGC AACGCATTGG TTGAGGCCAC ACTTAGTTTT TCTAAACAGT TTTTGAATCA TCATTAA
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Protein sequence | MLHSLYPEIE PFSQQYLKVS PLHQLYIEQC GNEQGIPVIF LHGGPGSACR EQHRCYFDPA IYHIILFDQR GCGRSKPQGE LKENNTLALV EDINTIRKHL GISQWLVFGG SWGATLALVY AKQYPKQVLG MILRGVFLGR AQDINWVYTN KGAAQIYPDA WQALVDNLPI EQQQAPLNAL YQRLINSDEQ ISRDAYNRLQ QWESAILNIQ PGTPASIVDT INKKPSIIQL HYSINRCFIE KNPILEQITQ ISDIPIKIIQ GRYDFVCPVE QAWQLAYHCP QAKLTVIDMA GHLANEPLMS NALVEATLSF SKQFLNHH
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