Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0768 |
Symbol | selD |
ID | 3519401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 786206 |
End bp | 787240 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637283233 |
Product | selenide, water dikinase |
Protein accession | YP_267517 |
Protein GI | 71279082 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0709] Selenophosphate synthase |
TIGRFAM ID | [TIGR00476] selenium donor protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.306081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCAA TTCGCTTGAC TCAATACTCA CACGGCGCAG GCTGTGGCTG TAAAATTTCT CCATCGGTAC TTGATGTGAT GCTAAAGTCA TCACTTGCTT TACCCGTGAA TGACGCACTT TTAGTGGGTA ATAGTACTAA AGACGATGCG GCCGTTTTCG ATATTGGTAA TGATCAAGGT GTGATTTCAA CCACTGATTT CTTTATGCCC ATTGTTGATG ACCCAACTGA CTTTGGTAAA ATTGCTGCCT GTAATGCCAT CAGCGATATT TATGCCATGG GCGGAAAACC GATCATGGCG ATAGCTATTT TGGGCTGGCC AGTCAATCTT TTAGCACCTG AAATTGCCCA ACAAGTACTT GATGGCGCTA GAGCTATCTG TGCTGAAGCG GGTATCCCGT TAGCAGGCGG TCATTCCATT GATGCGCCAG AGCCTATCTT TGGTTTAGCG GTTACGGGAC TAATTAATAA TGCGCACATT AAGCGAAATA ATACTGCAGA GGTTGGCGAT CTTCTGTACT TAACCAAGCC ATTAGGTATT GGCATTATGA CCACGGCTGA AAAACAAGGG AAATTGTTAC CTGAACATGC GCAACTAGCA CCACAAGCGA TGAAGACCCT AAATGTCATT GGACAGAAGT TTGCAGAACT AGAGGTAGTT ACTGCTATGA CCGATGTAAC CGGTTTTGCA CTATTAGGAC ACCTTTTAGA AATGTGTCAG GGCAGTGGGG TTGCTGCAGT TATTGATTTT GAGCAAGTAC CGCGTCTTGA TTTCGTCAAT GATTACATTG ATCAAGGTTG CGTACCTGGT GGTTGTGAGA GAAACTTTAT CAGCTATGGC GAGCATGTTG GGCCGTTAAG CCCCAAACAA AAAATACTTT TGTGTGACCC TCAAACCAGT GGTGGTTTAC TTGTGGCAGT GAAACCACAA GGCAAAGAAG CTTTTGAAGC GTTATGCCAA GAGAATGGTC TTAATCTACA ACCTATTGGT GAACTCGTGG CGGCAACTTC GCCTACAGTG AGTTTGTTGT CATGA
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Protein sequence | MTSIRLTQYS HGAGCGCKIS PSVLDVMLKS SLALPVNDAL LVGNSTKDDA AVFDIGNDQG VISTTDFFMP IVDDPTDFGK IAACNAISDI YAMGGKPIMA IAILGWPVNL LAPEIAQQVL DGARAICAEA GIPLAGGHSI DAPEPIFGLA VTGLINNAHI KRNNTAEVGD LLYLTKPLGI GIMTTAEKQG KLLPEHAQLA PQAMKTLNVI GQKFAELEVV TAMTDVTGFA LLGHLLEMCQ GSGVAAVIDF EQVPRLDFVN DYIDQGCVPG GCERNFISYG EHVGPLSPKQ KILLCDPQTS GGLLVAVKPQ GKEAFEALCQ ENGLNLQPIG ELVAATSPTV SLLS
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