| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0642 |
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| Symbol | |
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| ID | 3521237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 639928 |
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| End bp | 641208 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283107 |
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| Product | putative ammonium transporter |
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| Protein accession | YP_267392 |
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| Protein GI | 71280768 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAA ATATATTTCA ATTACAATAC GCCTTAGACA CCTTTTATTT TCTTATTTGT
GGTGCCTTAG TAATGTGGAT GGCCGCTGGT TTTTCAATGC TTGAAGCTGG CTTAGTACGT
GCTAAAAACA CTACCGAAAT TTTGACTAAA AACGTCGCGC TATATGCAAT TGCTTGTATT
ATGTACCTTG TTGTAGGTTA CGATATTATG TATGGCGGTG GTGTTTTCTT AAATGGTATT
GCGCTTGACG GTGCTAGCGA TGCAGAAGCA CTTGTTGGTG CTGTACTTGC TGAATCGGCT
GAAGCTGGTT TTGATGGTGG CGCGGTTTAC TCAAACGCTT CTGATTTCTT CTTTCAAGTA
GTGTTTGTTG CTACGGCAAT GTCGATTGTA TCAGGTGCTG TTGCTGAGCG TATGAAGTTA
TGGGCTTTCT TAGCATTTAC CGTTGTATTA ACTGGCTTTA TCTATCCTAT GGAAGGTAGC
TGGACTTGGA ACGGTGATGC TGTCTTTGGC TTATATACCT TAGGTGACTT AGGTTTCTCT
GATTTTGCTG GTTCAGGTAT TGTTCACATG GCAGGTGCTT CTGCAGCATT AGCTGGTGTG
TTATTACTTG GTGCTCGTAA AGGAAAATAC AGTAAAGACG GTAAAGTTAA CGCCATTCCT
GGTGCTAACT TACCCATGGC GACATTAGGT ACCTTTATTT TATGGATGGG TTGGTTTGGT
TTTAATGGTG GCTCAGTATT AAAACTAGCT GACATTAATA GTGCTAACTC AGTAGCTATG
GTGTTTTTAA ATACCAATGC TGCCGCTGCT GCGGGTGCAA TATCAGCGCT TATCTTTGCT
AAAATATTGT TTAAAAAAGC GGATTTAACC ATGACATTAA ACGGTGCATT AGCAGGCTTA
GTGGCTATTA CGGCTGAACC TTCAACACCT TCACCATTGC AAGCAACAAT CTTTGGTGCA
ATTGCGGGCG TTATTGTGGT GATGTCAATT TTAGCTTTAG ATAAAGTGAA GATTGATGAC
CCAGTAGGTG CTATCTCAGT TCACGGTGTT GTTGGTTTCT TTGGTTTAAT GATTGTTCCA
ATCACTAACT CGTCGTCTAG CTTCAGTGGT CAGCTTATTG GTGCAGCAAC TATCTTTGTT
TGGGTATTTG TTACTAGTTT CATTGTGTGG TTTGCTCTGA AAAAAGTTAT TGGTATTCGT
GTAAGTGCTG AAGAAGAATA CGAAGGTGTT GATATCTCTG ACTGTGGTAT GGAAGCTTAC
CCTGAGTTCA CTAGAGGTTA G
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| Protein sequence | MEQNIFQLQY ALDTFYFLIC GALVMWMAAG FSMLEAGLVR AKNTTEILTK NVALYAIACI
MYLVVGYDIM YGGGVFLNGI ALDGASDAEA LVGAVLAESA EAGFDGGAVY SNASDFFFQV
VFVATAMSIV SGAVAERMKL WAFLAFTVVL TGFIYPMEGS WTWNGDAVFG LYTLGDLGFS
DFAGSGIVHM AGASAALAGV LLLGARKGKY SKDGKVNAIP GANLPMATLG TFILWMGWFG
FNGGSVLKLA DINSANSVAM VFLNTNAAAA AGAISALIFA KILFKKADLT MTLNGALAGL
VAITAEPSTP SPLQATIFGA IAGVIVVMSI LALDKVKIDD PVGAISVHGV VGFFGLMIVP
ITNSSSSFSG QLIGAATIFV WVFVTSFIVW FALKKVIGIR VSAEEEYEGV DISDCGMEAY
PEFTRG
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