Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0628 |
Symbol | prkB |
ID | 3521629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 624421 |
End bp | 625320 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283093 |
Product | phosphoribulokinase |
Protein accession | YP_267378 |
Protein GI | 71281158 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.470735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCAC GCAATCCAAT CATAGCAGTC ACTGGCTCAT CAGGAGCGGG TACATCAACA ACGACTGCTT CCTTTGAGCA TATCTTTAGA ACACTCGGTA TATCCTCTGT CAATGTAGAA GGTGATAGCT TTCATCGCTT CTCACGACAA GAAATGGATA TGGAAAAACG TAAAGCGAAA GAAGCACGGA AAAACATTAG TTACTTTGGT GATCTTGCTA ATGACTTTAG CGCTTTAGAG AAACAATTTC GTGATTATAG CGAAACAGGT AGAGGACAAA TTAGGCGCTA TTTACATACG TTTGATGAGG CCGTTCCGTA CAATCAAATG CCAGGTACTT TTACTCCTTG GGAAGAATTT GGTGAAGGTA CTGACTTGTT ATATTACGAG GGGCTTCATG GCGGTGTTGT AACTAAGGAT AATGATGTAG CAAAGCATGT CGATTTGCTT ATCGGCATGG TACCTATTGT TAATTTAGAG TGGATTCAAA AGATTATTCG CGATACTAAT AAACGTGGGC ATTCTAGAGA AGCGGTGACC GCAAGTATCG TTCGCAGTAT GGAAGATTAT ATCTCTTTCA TCACCCCCCA GTTTTCTCGC ACTCATATCA ATTTCCAGCG AGTACCTACG GTAGATACCT CTAATCCATT CAGTGCTAAG GCAATCCCTA GCTTAGATGA AAGTTTTGTG GTTATTCGCT TTCGTGAAGT CAAAAATGTA GATTTTCAGT ATTATCTTCG TATGATTGAT GGATCATTTA TGTCGCGAAT TAATACCCTT GTCGTTCCTG GTGGAAAAAT GGGTCTAGCG ATGGAGTTAA TTTTAACACC GCTAATACGG GATTTAATGG ATCGTAAAAA CCAAGCAAAC AAACAACTAG ACTGGATGAG CGATTTATAA
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Protein sequence | MSSRNPIIAV TGSSGAGTST TTASFEHIFR TLGISSVNVE GDSFHRFSRQ EMDMEKRKAK EARKNISYFG DLANDFSALE KQFRDYSETG RGQIRRYLHT FDEAVPYNQM PGTFTPWEEF GEGTDLLYYE GLHGGVVTKD NDVAKHVDLL IGMVPIVNLE WIQKIIRDTN KRGHSREAVT ASIVRSMEDY ISFITPQFSR THINFQRVPT VDTSNPFSAK AIPSLDESFV VIRFREVKNV DFQYYLRMID GSFMSRINTL VVPGGKMGLA MELILTPLIR DLMDRKNQAN KQLDWMSDL
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