| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0625 |
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| Symbol | rpsD |
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| ID | 3519538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 622142 |
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| End bp | 622762 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283090 |
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| Product | ribosomal protein S4 |
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| Protein accession | YP_267375 |
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| Protein GI | 71277977 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00138792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAGAT ATTTAGGTCC TAAGTTAAAA CTTAGTCGCC GCGAAGGTAC AGATTTGTTC
CTTAAAAGCG GTGTTAGAGC AATTGACACT AAATGTAAAA TCGAAACAAT ACCAGGTCAG
CACGGCGCCC GTCGCGGTCG TTTGTCAGAC TATGGTGTTC AACTTCGTGA AAAACAAAAA
GTTCGTCGTA TTTTTGGCGT GCTAGAAAAA CAATTCAGTA ATTACTACAA AGAAGCGGCA
CGTCAAAAAG GCAACACAGG TGAAAACTTG TTACAGCTTT TAGAGACTCG TTTAGATAAC
GTAGTTTACC GTATGGGTTA TGCAAGCACT CGTGCTGAAG CCCGTCAATT AGTTAGCCAT
AAGGCTATCG TGGTAAACGG CGTTGTAGTT AATATTCCAT CTTTCACTGT TAAAGCTGAA
GATACTGTTT CTGTTCGTGA GAAGTCTAAA ACTCAAGCGC GTATTATCGC TGCTTTAGAA
TTAGCTGATC AACGTGAGAA ACCACTTTGG GTTGAAGTAG ATACTAAGAA GCTTGAAGGC
GTTTTCAAAC GTGTTCCAGA TCGTGCTGAC TTATCTGCCG AAATTAATGA ACAGTTGATT
GTTGAACTTT ACTCTAAGTA G
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| Protein sequence | MARYLGPKLK LSRREGTDLF LKSGVRAIDT KCKIETIPGQ HGARRGRLSD YGVQLREKQK
VRRIFGVLEK QFSNYYKEAA RQKGNTGENL LQLLETRLDN VVYRMGYAST RAEARQLVSH
KAIVVNGVVV NIPSFTVKAE DTVSVREKSK TQARIIAALE LADQREKPLW VEVDTKKLEG
VFKRVPDRAD LSAEINEQLI VELYSK
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