Gene CPS_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0613 
SymbolrplE 
ID3521213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp616397 
End bp616942 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content41% 
IMG OID637283078 
Product50S ribosomal protein L5 
Protein accessionYP_267363 
Protein GI71280744 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.684436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAC TGCATGATTT ATATAAAGAT ACAGTTGTAG CTGAGTTGCA AAAGCAATTT 
GGTTATAAAA GTGTCATGCA AGTCCCTCGG ATTGAAAAGA TCACCCTTAA CATGGGTGTT
GGTGAAGCTA TTTCTGATAA GAAAGTTTTA GAACACGCCA CAAATGATCT TACTGCAATC
TCAGGGCAAA AGCCGATCAC GACAGTAGCA CGCAAATCAG TTGCGGGCTT CAAAATTCGT
GAAGGCTACC CTATTGGTAC GAAAGTAACT CTACGCGGCG AGCGTATGTG GGAATTTTTA
GAGCGTTTAA TCTCTATTTC TATTCCTCGT ATCCGTGACT TCCGTGGCTT AAATCCTAAG
TCATTTGATG GTCGTGGTAA CTACAGCATG GGCGTTCGTG AGCAAATTAT CTTCCCTGAA
ATCGAATACG ATAAAATCGA TAAGATTCGT GGATTAGATA TCACTATTAC TACTAGCGCG
AAAGATAACG AAGAAGGACT AGCTTTATTG TCTGCCTTTG ATTTCCCGTT CAAGAAGAAG
GTGTAG
 
Protein sequence
MAKLHDLYKD TVVAELQKQF GYKSVMQVPR IEKITLNMGV GEAISDKKVL EHATNDLTAI 
SGQKPITTVA RKSVAGFKIR EGYPIGTKVT LRGERMWEFL ERLISISIPR IRDFRGLNPK
SFDGRGNYSM GVREQIIFPE IEYDKIDKIR GLDITITTSA KDNEEGLALL SAFDFPFKKK
V