Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0586 |
Symbol | |
ID | 3522834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 588046 |
End bp | 589188 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637283051 |
Product | glycosyl transferase, group 1 family protein |
Protein accession | YP_267336 |
Protein GI | 71282361 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00449508 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAG AAAAGATGTC AACAATTATA TTTATTAATA ATTTAGGGCT TGGTGGAGCT GAACGAGTGG TTTCCCGATT ATTTCAAAAT AGAGATATAA ATGATATAGC AACTCTGTGG GTATTCAATG ATAACTTCTT TTACGATTGC ACAGCAAAAA AGAAAGTTAT TTTAAGTAAA AAATATAAAT TACTTACTTA TATTAATGCA TTGATTAAAT TGTTGAAGCT CGATGATACT AAGTTAGTTC AAGCTCACCT TAATCTACCT ATATTACTAT CAACGTGTGC TAAATTATTT GGGGCAAAAT TTAATTTAAA AACAGTTCAC TGTTTTGCGT ACAGTAGTTT TTATAATAGG AGGGGTTTTT TGGGAAAAAG CCATAAGTTT ATATTTTCTA AACTTTTAAA AAAAGCTGAC TTCCACACAT TTAAATCAAG GGAAATGGTC GATGATTTTG TAGAAACCTT CGGGTGGAGG CCTGAACGTT ATTCTGTAAT TTATAACCCT TATGATATTG AAAATATTAC TAGATTATCT AATGAAGTCG TCAATCAATG TGATTTAAAA AATAACAAAC TAAATGTAGC AATTGTAGGC AGGTTAAATA TCTCTAAGCG TTCTTTTGAT GTAATTGAAT TAGCTTTAGG TACATCCGAT ATTGCACATT ACCACTTTTT CGGTGATGGA CCTTTAAAAG AAGACCTGTT AAAGGAAGTT AAAAATAGAA AAATCAATAA TGTTACAGTG CATGGCATGA TAAAAAACCC ATTTAAGTAC GTGAGAAAAA TGGGGGTGTA TCTTTCTCTA TCTGAGTCTG AAGGCTTCCC AAATGCTCTG ATTGAGTCGA TGATATGTAA TGCAATTCCT ATACACAGTG ACTGTAAAAC TGGTCCTAAA GAAATTTTAT GTGATAATTA TAAAGATTAT TCTAGCATAA AGTCTGAATT TTCGGTCCAA AAAAGAGGGG TGTTATTTCC TGTTGGCGAT ATGCTTGGCG CATCTAAGGC AATACTTTAT GTATTTGAAA ATTATGTAGA ATTAAGAGAG GGGTTTAATA GTGAAAGTCG CGAATTTATT GACTCTTTAG CTTTTGACAA AATATCTCAA GAATATTACT TAACTTTAAA TAAGCATTCT TAA
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Protein sequence | MDLEKMSTII FINNLGLGGA ERVVSRLFQN RDINDIATLW VFNDNFFYDC TAKKKVILSK KYKLLTYINA LIKLLKLDDT KLVQAHLNLP ILLSTCAKLF GAKFNLKTVH CFAYSSFYNR RGFLGKSHKF IFSKLLKKAD FHTFKSREMV DDFVETFGWR PERYSVIYNP YDIENITRLS NEVVNQCDLK NNKLNVAIVG RLNISKRSFD VIELALGTSD IAHYHFFGDG PLKEDLLKEV KNRKINNVTV HGMIKNPFKY VRKMGVYLSL SESEGFPNAL IESMICNAIP IHSDCKTGPK EILCDNYKDY SSIKSEFSVQ KRGVLFPVGD MLGASKAILY VFENYVELRE GFNSESREFI DSLAFDKISQ EYYLTLNKHS
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