| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0576 |
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| Symbol | |
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| ID | 3520713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 576233 |
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| End bp | 577540 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283041 |
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| Product | sigma-54 dependent DNA-binding response regulator |
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| Protein accession | YP_267326 |
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| Protein GI | 71280249 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAAA TATTAATCGT TGATGATAAC CCCGATATAC TCGAAGCCCT TGAGTTGTTA
TTAAGTTTGC ATGGTTATGC TGTGCTGACG GCTGAGAATG AGAAACAAGC ATTGTTGGCT
GTATCTCATC AACGTGTTGA TTTAGTTATT CAAGATATGA ATTTCGCGCA AGGTATCACC
TCTGGAAAAG AAGGCAAATC ACTATTTACT GCTTTGAAAG CACTAAATAG TGATTTGCCT
ATCATCCTAA TTACCGCGTG GACTCAATTA GAAACAGCCA TATCGTTGGT GAAAAGTGGC
GCAACGGACT ACTTACAAAA ACCTTGGGAT GATGTAAAAC TGCTAGATTT AGTGGCAAAA
TATAGCCTGA ACTCCAAGAT AAACCAAGAT AAGAACAATC AAAGCGTGAG CAATCAAAAG
CCCGCGGATG ATTTCATTTA CAAAAGCCAA GAAATGCAAA CCTTGATATC TCAAGCGAGC
AAAGTAGCGG GTGCAAACGT AAATGTATTA ATTACCGGAG CTAATGGTGC AGGCAAAGAG
AAGCTTGCCG ATTATATTCA CCAACAATCT CCGCGTTATA ACAGTGCTTT TATTAAAGTA
AATATGGGGG CTTTACCTCA TGACTTAATG GAAGCAGAAC TTTTTGGTGC GGAAAAAGGT
GCATTCACGG GAGCCAATCA AGCGAGGATT GGTCGTTTTG AAGCCGCGGA TGGCGGCACA
TTGTTTTTAG ATGAAATCGC TAATCTGACC TTAGCAGGTC AAATGAAATT ACTCAGAGTA
TTGCAAACCG GTGAATTTGA ACGCTTAGGG GCTAACGCAA CATTGAAAGT GGATGTGAGA
GTACTTAGTG CCACTAATGC CGATTTACGT TTAGCTGTTC AGCAAGGTAC TTTTCGGGAA
GACTTATATT ATCGGTTAAA TGTTATAGAG TTAAATTTAC CTGATTTAGC GTACAGAAAA
GCTGACATTG TTCCGCTAGC ACAATACTTT ATCGGCAATG ATTGTTCACT GAGTGATGAA
GCAGCACAAA CGTTAACGGA TTATACTTGG CCGGGTAATG TACGTGAATT AGAGAATGCC
TGTAAGCGCG CGTTAGTTTT TGCTAATAGT AGTACCTTAA CGGCAAGTGA CTTTCAATTG
GCTTCGAGTC AAAAAGAAGC CGCGTTAGGT GAAAAGGGAA ATATTGAGCA GGTACTGATT
AAGCATAAGG GCGTGATCAA ACATACGGCA CTCGAGTTAG GGTTAAGTCG ACAAGCTTTA
TACCGCCGTA TAGAAAAATA TCAAATAGAT GTAGGCTCAT TATGTTAG
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| Protein sequence | MPQILIVDDN PDILEALELL LSLHGYAVLT AENEKQALLA VSHQRVDLVI QDMNFAQGIT
SGKEGKSLFT ALKALNSDLP IILITAWTQL ETAISLVKSG ATDYLQKPWD DVKLLDLVAK
YSLNSKINQD KNNQSVSNQK PADDFIYKSQ EMQTLISQAS KVAGANVNVL ITGANGAGKE
KLADYIHQQS PRYNSAFIKV NMGALPHDLM EAELFGAEKG AFTGANQARI GRFEAADGGT
LFLDEIANLT LAGQMKLLRV LQTGEFERLG ANATLKVDVR VLSATNADLR LAVQQGTFRE
DLYYRLNVIE LNLPDLAYRK ADIVPLAQYF IGNDCSLSDE AAQTLTDYTW PGNVRELENA
CKRALVFANS STLTASDFQL ASSQKEAALG EKGNIEQVLI KHKGVIKHTA LELGLSRQAL
YRRIEKYQID VGSLC
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