| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0528 |
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| Symbol | |
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| ID | 3518486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 525408 |
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| End bp | 528161 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637282993 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_267286 |
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| Protein GI | 71278736 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.668736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACT CCACGATGAA GTGTATCAAG CTAGCAGCGA TAGTATGCAT AGCTATAGGA
CTCTCTGCTT GTTCAGAACA AAAAACAACA CAAGAGTATA TTTTAGCCTC GAAAGTTTAC
CTTCAGAAAC TTGAGTATGG TGCAGCAATA GTTGAATTAA AAAATGCGGT TCGACAAACA
CCAAAAGATG CTGAAGCGCG GTATTATTTA GCTAAAGCTT ACTCCGAGCA AGGCAGTTAT
GTAAACGCCG AAAAGGAGCT AGATAAAGCA GAACAGTTTG GTTTGGAAAT GAATCTGTTG
CTACCTGATT TGGTTTTTAT AAAATCAAAA TTGAATAAAG TCGAAGAAGT ATACGCTTTA
ATGGAAAATG TAGAGTCTTT AAATGATGAG CAATACATCG TTGTTTTAAC ATATGCTGGT
ATCACTGCAC TGAATAACAA AGAGCTAGAA AGAGCTCAAG ATTTTATAGC TCAAGCAAAT
ACAATTAGTG AAACGTCTCT TTATAGTAAA ATGGGAGCGG CTTATTTACT CCATGCGGAA
GACAATTTTT CAAAAGGGAT AGAGATAATT GATACTGTGT TGGGCGAATC GCCAGACTTT
ACAGAGGCAC TTTTACTGAA AGGTCATTTG TTATTTTCTT CAGAACAATT TATCCAAGCA
AATGGGGTAT ATACCAAGTA CAGACAACTA CATCCTTTCG CTAACAAAGT TCTTTTCTTT
GAAGTAAATA GTTTGATCTC AGCTGGGGAG TATGAGCAAG CAGATGTTAA GGCAACAGAG
TTAATAAAAC GTTTCAAAAA TTCACCCTTG GCTCATCAAT ATAAAGCCCA AGTTGAGTAT
CAAAAGAAAA ATTATGAAGA TGCGAGATCT TATGCAATTA GTGCAGCCCA GCAAGGGAAT
GAGTTTATTA TTTCAAAATT GATTGCTGGT ATGAGTTCTT ATCAATTAGG AGATATTGAA
CAAGCCTATG GTTATTTAAA TCAAACTGAA AAATATTTAC CCTCATCCCA TCCAATAAAA
AGGATACTTG CTTCTATTAA AATTAAACTA GGGTATACCA CAGAAGGTAT TGTTCAATTA
AGTGCATTAG AGGGGTTAAC CACATCGGAT GCCGGCTTAT TTCAATCATC AAGTATTGAA
TTGATAAAAG CGGGAGATTT TGAAAATGCT ATAAAGTTGC TAGATAAAGC ATCTATCATA
GCACCAGAAA ATGCCTCTGT AGCAGCGCAA AAAGGCATGC TAAAACTTTC TCAAAACGAT
AAAACAGGTA TTGCATCGCT CGAACATGCG TTAAACCTAG ATCCTAATTT AAAAGATGTT
GAATTTTCTT TGGCAATACA ATATTTAGAT AATGGACAAG AGAAAAAAGT GCGGTCTATT
GCGAAAAAAT GGATTGCCTC GCAAGATAAC CAAGCATCTG GATATTTACT GTTAGGGATA
ATTCATTCGA ATAATAATCT GAGTTCAAAA GCCGAAGAAA ACTATCAAAA AGCGCTATCA
ATTGAACCTG AAAATTACAC TGCACTATTT TATCTCGCCG ATATTGCAGA GGATGCTGAT
AGGATATTAG ACGCAGTTGA CTATTATCAA AAAGTAGTGA CTATTTTACC TGAGCATAAA
GCCGCCATTC AAAAATTAAG TCGATTACAG CTCAAGCACA ACAATACGTC TAACAATGTT
GAATTTTTAT CAACATTAGC GGCTAAACAC CCTAAAAACA TCACCTTAGC ATTAGGATTA
GCACAAAATT TACGTTTAAA TAATGAATTA AAAAAAGCCA TTACATTATT GGAAAGCATG
TCTGATTGGG CTAGAAGTTC TCAACAATAT TGGGCTATTT TAGGTGATAA TTATCTTCAA
GCGAAAAGTC ACACCAAAGC GAAAGAATGT TTTAAAAAAG TGCTTGCTTT AAATCCAAAT
AATTTTGTCG CACATTTGCG CCTAATTGCT ATATCTGAAG TTAAGCGTAA CTACAAGCAA
GCCTTAACAT ATACGATAAG CTCATTAGAA AGATTTGAAC ACAATACTCG GTTATTAATA
TTAAAAGCTA ATTTTGAGTT ATTAACCGGC GATCTAGTAT CAGCTAAGAA AACGTTGAGA
TATCTACAAG AACAAAAAGT GTCACACCAC CTTATCAATA AATTTGTTGG GGAGCTGGCG
TTAGCTGACA AAGACTATCC TAGCGCTATT GATAACTTCC ACGAACTGTA CCAAAAAAGC
CCAACAGCGT TAAATGTAAT GTTATTAGCA AGAGCATTGA GCTTCAATGG TCAAAAAGCA
GAAGCTGCCC AGACCATAGA GAGTTACCTT TCTAGAATGA TAAAAGATCA TAAAGTAAGG
CTTTTATTAG CTGAGTTATA TATGCAGTTT GATGAGGCTA AGGCTATCAA GCACTTAGAG
ATAATAAACC AAAGTGAACA AAACAATGCG GTGGTATTAA ATAACTTGGC GATGCTGGAG
TTGAAACGCG CTAGACCCGA GCAAGCATTG TTATATGCTG AAAAAGCGTT TGAACTTAAA
TCAGGCATTC ATCAAATATC AGACACCTAT GGTGCGGCCT TAGTGACGGT TAAAAATTTC
GACAGCGCGA TTATCGTGTT GCTAAATGCC ATCAATCAAG GCAGTGAAGC TGAAACCACC
TATGTGAATT TAACTAAAGC TTATTTAGCT ACCGGCAAAA CGGATAAAGT GAAAGCCCTA
CTAGACTCTA TCAAAGATAG AACCTTCTAT TCTAAAGTTC AGGCTATGAG GTAA
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| Protein sequence | MNDSTMKCIK LAAIVCIAIG LSACSEQKTT QEYILASKVY LQKLEYGAAI VELKNAVRQT
PKDAEARYYL AKAYSEQGSY VNAEKELDKA EQFGLEMNLL LPDLVFIKSK LNKVEEVYAL
MENVESLNDE QYIVVLTYAG ITALNNKELE RAQDFIAQAN TISETSLYSK MGAAYLLHAE
DNFSKGIEII DTVLGESPDF TEALLLKGHL LFSSEQFIQA NGVYTKYRQL HPFANKVLFF
EVNSLISAGE YEQADVKATE LIKRFKNSPL AHQYKAQVEY QKKNYEDARS YAISAAQQGN
EFIISKLIAG MSSYQLGDIE QAYGYLNQTE KYLPSSHPIK RILASIKIKL GYTTEGIVQL
SALEGLTTSD AGLFQSSSIE LIKAGDFENA IKLLDKASII APENASVAAQ KGMLKLSQND
KTGIASLEHA LNLDPNLKDV EFSLAIQYLD NGQEKKVRSI AKKWIASQDN QASGYLLLGI
IHSNNNLSSK AEENYQKALS IEPENYTALF YLADIAEDAD RILDAVDYYQ KVVTILPEHK
AAIQKLSRLQ LKHNNTSNNV EFLSTLAAKH PKNITLALGL AQNLRLNNEL KKAITLLESM
SDWARSSQQY WAILGDNYLQ AKSHTKAKEC FKKVLALNPN NFVAHLRLIA ISEVKRNYKQ
ALTYTISSLE RFEHNTRLLI LKANFELLTG DLVSAKKTLR YLQEQKVSHH LINKFVGELA
LADKDYPSAI DNFHELYQKS PTALNVMLLA RALSFNGQKA EAAQTIESYL SRMIKDHKVR
LLLAELYMQF DEAKAIKHLE IINQSEQNNA VVLNNLAMLE LKRARPEQAL LYAEKAFELK
SGIHQISDTY GAALVTVKNF DSAIIVLLNA INQGSEAETT YVNLTKAYLA TGKTDKVKAL
LDSIKDRTFY SKVQAMR
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