| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0485 |
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| Symbol | |
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| ID | 3521834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 489273 |
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| End bp | 491381 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282950 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_267243 |
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| Protein GI | 71281362 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.517963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCTT ACGTTTTTAC TCCATCTCTA TTGGCTTTAC TTATTGCCAA TACTTGTTAT
GCATCATCAG CTGAAACATT ACCCGACGGT TCGGCCAAAA GTGATCTTGA ACGAATAACT
GTTACCGCAA CCCGTAAAGA AGCCCTTGAT ACAGACTTAG CCATGTCTGT GCATGGTATA
AGTGAAGAAG AACTCCAAAT GGATAATGGC CAGCATGTCG CTGAATCATT AAACAGTATT
TCAGGGGTGT TAATTGATCA GTTATCAGGT GGTCAAGGTC ATAAAACATC AATTAGAATG
CCGATGAATA CCAGTGGTTA CTATTTATTT CTGCAAGATA ATGTGCCTTT ACAGTCAGCT
GCATTTTTCA ATCATAATGC CTTGTGGTGG TCTAGTTTCA ATTCTAATGT TGGCCGAATG
GAAGTACTTA AAGGGGCAGG AACCGCTTTG TATGGCTCGG GCGCTGTTGC CGCCACCGTA
AACATTTTGA CCAAACCGGT TGTCGAACAA ACTGAAACTG CGATGGATGT TGTGTTGGGT
CAAGAGCAAT ACGGTAAAGT ACAAATTAGT CACAGTAATA AACTTTCAAA TACACAAGGT
ATTCGAGCAT CGGCTTCCTA TGTCACAAAT GAAGGCTGGC GAGATCATAC AGCCTCACAG
CGTGCAGAGA TCAACTTGCG CCATGAATAT GAATTATCAG CCAATGAGCG GTTAATCACC
TCTTTTACTG CCTCTGATCT TGAACAAGAA ATGGCAGCGA GCTTGAATGA TGACCAGATT
GAAAACGATC GTACTAACTC AGGTTTATCT GATGAAGTAC TGGCGAGTGA TCCTTTACGT
AAAACACAAT ATATGCGTTT AACAACGCAG TGGGATCAAA TGAATGAGGA CAGTTATTAT
TCTGTAATTC CTTACTTGCG TCACCGTACT AATGATTATA CGGCGACATG GAATAAGAAC
ATGCCTAGAG TGCAATCGAC AGTGAATACG GTAGGTTTAT TAGCGCTGGC GAATTTTGTT
CATACGGCTG ACAATGAAAC AACAATAGGT GTTGATTTTG AATACACTGA AGGTGACCAA
CTCTCTTATC AGCCACTAGA TTTCACCACG ACAGGTTGGG GCGCTGATAC CTTTGTCAAA
GGTGAGAAAT TCTACGATGA CACCACAAGT TACACCAGCA TTTCACCTTA CCTGCAACAC
AAGCGCACAT TGACAAAAAA TCTCGATTTA ACCCTTGGGG TTCGTTATGA CTATGCGAAA
TATGAATTTA CTAATCACCT TGGGGTTTAT GGTGATATAG GACATGGAAA AATAAGCTTA
GAAGACAGAG ATGATGATTT TTCACATCTC AGCCCTAAAG CAAGTTTGAA TTATCATTTA
TCTGAGAATA CGAGTACCTA TTTTAGGTAT GCCAACAGCT TTAGATTACC AACAGCGGGT
AGCCTTTATC ATTTAACCAC TAAGGATAGT GAAGTTGCTG CACCTGTTGA TCCTGAAACT
TCAGACACCT ATGAGATAGG CTATAAAGGT AATTTTGATA ACATAACATT CGATGCAGCT
CTATATTTTA TGGATGTTGA TGACGGCATA GTACATGCCT ATAACGATCA AGGTCAGCGT
TATTTAACTA ACGCCACTCG GGTACTTCAT AAAGGTATTG AGCTATCTAC TTTATGGGTA
ATCAATGACG AATTAAATTT GAGCGTTGCT TACAGTAAGA GTAAACATGA ATTTGATGAA
CATGACGATT ATTCAGGTAA TGAAATGCGT ATGGCACCCG ATTACATTGC TAATGTTCGC
TTACGTTATT TACCAAGTTA CCTTGAAGGT TTCTCAAGCC AAGTAGAGCT ACAATCGGTT
GGCGAATACT GGATGGATGA TGCAAACAGC ACAGACCCTG ACACTGGCCT TGAAAGAAAA
GATGATGGTT ACAGCATTGT TAACTTAAAA GCGCGTTATC AGCTAAATAG TCAACTTTCT
TTCAATGCAA GAATTCTTAA TTTAACAGAC AAGGTCTATG CCCAAGGCGG TGAATATCGT
TATGGCAAAA ATTCTTGGTC ACCGGGTGCG CCCAGAACTG CTTATATGGG TATGAGTTAT
CAATGGTAA
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| Protein sequence | MQPYVFTPSL LALLIANTCY ASSAETLPDG SAKSDLERIT VTATRKEALD TDLAMSVHGI
SEEELQMDNG QHVAESLNSI SGVLIDQLSG GQGHKTSIRM PMNTSGYYLF LQDNVPLQSA
AFFNHNALWW SSFNSNVGRM EVLKGAGTAL YGSGAVAATV NILTKPVVEQ TETAMDVVLG
QEQYGKVQIS HSNKLSNTQG IRASASYVTN EGWRDHTASQ RAEINLRHEY ELSANERLIT
SFTASDLEQE MAASLNDDQI ENDRTNSGLS DEVLASDPLR KTQYMRLTTQ WDQMNEDSYY
SVIPYLRHRT NDYTATWNKN MPRVQSTVNT VGLLALANFV HTADNETTIG VDFEYTEGDQ
LSYQPLDFTT TGWGADTFVK GEKFYDDTTS YTSISPYLQH KRTLTKNLDL TLGVRYDYAK
YEFTNHLGVY GDIGHGKISL EDRDDDFSHL SPKASLNYHL SENTSTYFRY ANSFRLPTAG
SLYHLTTKDS EVAAPVDPET SDTYEIGYKG NFDNITFDAA LYFMDVDDGI VHAYNDQGQR
YLTNATRVLH KGIELSTLWV INDELNLSVA YSKSKHEFDE HDDYSGNEMR MAPDYIANVR
LRYLPSYLEG FSSQVELQSV GEYWMDDANS TDPDTGLERK DDGYSIVNLK ARYQLNSQLS
FNARILNLTD KVYAQGGEYR YGKNSWSPGA PRTAYMGMSY QW
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