Gene CPS_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0483 
Symbol 
ID3520477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp485685 
End bp486596 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content37% 
IMG OID637282948 
Productputative beta-lactamase 
Protein accessionYP_267241 
Protein GI71280014 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG TTATCAGTAT TGTGAGTGTA TTAGCACTGA GCAGTTTTAC CCACCAAGCA 
GTTGCCAGTA GTGAACTCTG CCTTGTTAGT AATAATGATT GTACTTTTGT GTTAATTAGC
GAGAAGAAAA GTGAGGTGAT GACACAAGTA GTCAGTGAGA CAACGAGTGA AGATGTAAAT
ACTCACCATA GCGCCAAAGT GACTCAAGGC TCTTCATACA CAGAAGAAAA TGAGATGCTA
TCAGTGGTAA ATGAAGAGAG ATCTAAGCAA CGCTTATCAC CTTTTTCTAC CTTTAAAATC
ACTAATAGCC TTATTGCATT GGATAGCAAG CAAATAGCCA GCGCACAACA AGTGTTAACG
TTTGATAAAG AAAAGTATCC GGTAAAAGTG TGGTGGCCAT CGGTTTGGAA ACTTCCAGAA
TACGACCTTA CCACTGCATT TAAATTTTCT ATGGTGCCCA TTTTTAGACA ACTAGCGACG
GATATTGGTC AAGATAAAAT GCAGTCTTAC GTCACAAAAT TCAATTACGG AAATCATGAT
ATCTCATCGG GACTAGATGA TTTTTGGCTA AATGGCAGTA TGAAAATTTC GGCATTAGAG
CAAGTACGTT TTTTACAAAA AATGCATCGA GGACAATTAG GTGTTAGTCA GCACAGTATT
GATACTCTAA AAGAAGTTAT GTTAGTTGAA AAAAATGCTA ACTACTTACT CTATGCAAAA
ACAGGAGCAG GCAAAGCAAA TAGCAATGAT AAAAGCAGTA AGGCCATGTT AGGTTGGTAT
GTGGGCTTTG TTGAAAATGA TAAAGGTGTG CATTATTTTG CTTTCAATTT TACCCGTGGT
AGTTATGCAG AAATGAAAGC GGTTCGCGTT AAAATTGCTA GAAATCATTT GAAAAAAGCA
GGTGTTATTT AA
 
Protein sequence
MKKVISIVSV LALSSFTHQA VASSELCLVS NNDCTFVLIS EKKSEVMTQV VSETTSEDVN 
THHSAKVTQG SSYTEENEML SVVNEERSKQ RLSPFSTFKI TNSLIALDSK QIASAQQVLT
FDKEKYPVKV WWPSVWKLPE YDLTTAFKFS MVPIFRQLAT DIGQDKMQSY VTKFNYGNHD
ISSGLDDFWL NGSMKISALE QVRFLQKMHR GQLGVSQHSI DTLKEVMLVE KNANYLLYAK
TGAGKANSND KSSKAMLGWY VGFVENDKGV HYFAFNFTRG SYAEMKAVRV KIARNHLKKA
GVI